Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Six5P70178 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Six5P70178 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.28■□□□□ 0.52
Six5P70178 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Six5P70178 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Six5P70178 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Six5P70178 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Six5P70178 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Six5P70178 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Six5P70178 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Six5P70178 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.28■□□□□ 0.52
Six5P70178 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Six5P70178 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Six5P70178 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Six5P70178 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.27■□□□□ 0.52
Six5P70178 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Six5P70178 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Six5P70178 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Six5P70178 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Six5P70178 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Six5P70178 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Six5P70178 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Six5P70178 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Six5P70178 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Six5P70178 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Six5P70178 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Six5P70178 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.26■□□□□ 0.51
Six5P70178 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.26■□□□□ 0.51
Six5P70178 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Six5P70178 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.26■□□□□ 0.51
Six5P70178 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Six5P70178 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Six5P70178 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Six5P70178 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.26■□□□□ 0.51
Six5P70178 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Six5P70178 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Six5P70178 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Six5P70178 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Six5P70178 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.25■□□□□ 0.51
Six5P70178 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Six5P70178 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Six5P70178 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Six5P70178 Gm8493-201ENSMUST00000196881 489 ntBASIC18.25■□□□□ 0.51
Six5P70178 Gm43173-201ENSMUST00000202246 593 ntBASIC18.25■□□□□ 0.51
Six5P70178 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Six5P70178 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Six5P70178 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Six5P70178 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Six5P70178 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Six5P70178 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Six5P70178 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Six5P70178 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Six5P70178 Gm45417-201ENSMUST00000209533 758 ntBASIC18.24■□□□□ 0.51
Six5P70178 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Six5P70178 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.24■□□□□ 0.51
Six5P70178 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.24■□□□□ 0.51
Six5P70178 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Six5P70178 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Six5P70178 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Six5P70178 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Six5P70178 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Six5P70178 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Six5P70178 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.23■□□□□ 0.51
Six5P70178 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Six5P70178 Gm6139-201ENSMUST00000079261 882 ntBASIC18.23■□□□□ 0.51
Six5P70178 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Six5P70178 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Six5P70178 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Six5P70178 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Six5P70178 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Six5P70178 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.22■□□□□ 0.51
Six5P70178 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.22■□□□□ 0.51
Six5P70178 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Six5P70178 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.22■□□□□ 0.51
Six5P70178 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Six5P70178 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Six5P70178 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Six5P70178 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Six5P70178 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Six5P70178 Serp2-204ENSMUST00000228055 705 ntBASIC18.21■□□□□ 0.51
Six5P70178 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Six5P70178 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Six5P70178 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Six5P70178 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Six5P70178 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.21■□□□□ 0.51
Six5P70178 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Six5P70178 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Six5P70178 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Six5P70178 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Six5P70178 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Six5P70178 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Six5P70178 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Six5P70178 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Six5P70178 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Six5P70178 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Six5P70178 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Six5P70178 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Six5P70178 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Six5P70178 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Six5P70178 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms