Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Lsm6P62313 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lsm6P62313 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lsm6P62313 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lsm6P62313 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lsm6P62313 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lsm6P62313 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lsm6P62313 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lsm6P62313 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lsm6P62313 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Lsm6P62313 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lsm6P62313 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lsm6P62313 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lsm6P62313 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.11■□□□□ 0.33
Lsm6P62313 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.11■□□□□ 0.33
Lsm6P62313 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lsm6P62313 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.11■□□□□ 0.33
Lsm6P62313 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lsm6P62313 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lsm6P62313 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lsm6P62313 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lsm6P62313 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lsm6P62313 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.1■□□□□ 0.33
Lsm6P62313 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lsm6P62313 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lsm6P62313 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.1■□□□□ 0.33
Lsm6P62313 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lsm6P62313 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lsm6P62313 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lsm6P62313 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lsm6P62313 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lsm6P62313 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.1■□□□□ 0.33
Lsm6P62313 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm6P62313 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Lsm6P62313 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm6P62313 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm6P62313 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm6P62313 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm6P62313 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.09■□□□□ 0.33
Lsm6P62313 Gm43137-201ENSMUST00000198052 594 ntBASIC17.09■□□□□ 0.33
Lsm6P62313 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Lsm6P62313 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm6P62313 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm6P62313 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.09■□□□□ 0.33
Lsm6P62313 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Lsm6P62313 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lsm6P62313 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lsm6P62313 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lsm6P62313 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Lsm6P62313 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lsm6P62313 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.08■□□□□ 0.32
Lsm6P62313 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.08■□□□□ 0.32
Lsm6P62313 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.08■□□□□ 0.32
Lsm6P62313 Gm21956-201ENSMUST00000179946 522 ntBASIC17.08■□□□□ 0.32
Lsm6P62313 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.08■□□□□ 0.32
Lsm6P62313 Spcs1-204ENSMUST00000226782 949 ntBASIC17.08■□□□□ 0.32
Lsm6P62313 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lsm6P62313 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Lsm6P62313 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.08■□□□□ 0.32
Lsm6P62313 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Lsm6P62313 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Lsm6P62313 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lsm6P62313 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm6P62313 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm6P62313 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm6P62313 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm6P62313 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm6P62313 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm6P62313 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm6P62313 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm6P62313 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm6P62313 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm6P62313 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm6P62313 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm6P62313 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm6P62313 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm6P62313 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm6P62313 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Lsm6P62313 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm6P62313 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm6P62313 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm6P62313 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm6P62313 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Lsm6P62313 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm6P62313 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.06■□□□□ 0.32
Lsm6P62313 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm6P62313 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.06■□□□□ 0.32
Lsm6P62313 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.06■□□□□ 0.32
Lsm6P62313 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Lsm6P62313 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Lsm6P62313 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Lsm6P62313 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.06■□□□□ 0.32
Lsm6P62313 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm6P62313 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Lsm6P62313 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lsm6P62313 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lsm6P62313 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Lsm6P62313 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lsm6P62313 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lsm6P62313 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms