Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SmoP56726 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SmoP56726 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SmoP56726 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SmoP56726 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SmoP56726 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SmoP56726 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SmoP56726 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SmoP56726 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SmoP56726 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SmoP56726 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SmoP56726 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SmoP56726 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SmoP56726 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SmoP56726 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.72■□□□□ 0.75
SmoP56726 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.72■□□□□ 0.75
SmoP56726 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SmoP56726 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.72■□□□□ 0.75
SmoP56726 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SmoP56726 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SmoP56726 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SmoP56726 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.71■□□□□ 0.75
SmoP56726 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SmoP56726 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SmoP56726 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SmoP56726 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.71■□□□□ 0.75
SmoP56726 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.71■□□□□ 0.75
SmoP56726 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.71■□□□□ 0.75
SmoP56726 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.71■□□□□ 0.75
SmoP56726 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.71■□□□□ 0.75
SmoP56726 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.71■□□□□ 0.75
SmoP56726 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SmoP56726 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
SmoP56726 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SmoP56726 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SmoP56726 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SmoP56726 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.7■□□□□ 0.74
SmoP56726 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SmoP56726 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SmoP56726 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SmoP56726 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SmoP56726 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SmoP56726 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
SmoP56726 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SmoP56726 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.68■□□□□ 0.74
SmoP56726 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SmoP56726 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SmoP56726 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SmoP56726 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
SmoP56726 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SmoP56726 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SmoP56726 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SmoP56726 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SmoP56726 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SmoP56726 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.67■□□□□ 0.74
SmoP56726 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SmoP56726 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SmoP56726 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SmoP56726 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SmoP56726 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SmoP56726 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SmoP56726 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.66■□□□□ 0.74
SmoP56726 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SmoP56726 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.66■□□□□ 0.74
SmoP56726 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SmoP56726 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SmoP56726 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SmoP56726 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SmoP56726 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SmoP56726 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SmoP56726 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.65■□□□□ 0.74
SmoP56726 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SmoP56726 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SmoP56726 Gm42642-201ENSMUST00000200683 355 ntBASIC19.65■□□□□ 0.74
SmoP56726 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SmoP56726 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SmoP56726 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SmoP56726 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SmoP56726 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SmoP56726 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SmoP56726 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SmoP56726 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SmoP56726 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SmoP56726 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SmoP56726 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SmoP56726 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SmoP56726 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
SmoP56726 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SmoP56726 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SmoP56726 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.64■□□□□ 0.73
SmoP56726 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SmoP56726 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SmoP56726 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.64■□□□□ 0.73
SmoP56726 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SmoP56726 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.64■□□□□ 0.73
SmoP56726 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SmoP56726 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SmoP56726 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SmoP56726 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SmoP56726 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms