Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Abcd3P55096 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.48■□□□□ 0.39
Abcd3P55096 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Abcd3P55096 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Abcd3P55096 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Abcd3P55096 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Abcd3P55096 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.48■□□□□ 0.39
Abcd3P55096 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Abcd3P55096 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Abcd3P55096 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Abcd3P55096 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Abcd3P55096 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Abcd3P55096 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Abcd3P55096 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Abcd3P55096 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Abcd3P55096 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Abcd3P55096 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Abcd3P55096 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Abcd3P55096 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.47■□□□□ 0.39
Abcd3P55096 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Abcd3P55096 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Abcd3P55096 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Abcd3P55096 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Abcd3P55096 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Abcd3P55096 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Abcd3P55096 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Abcd3P55096 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Abcd3P55096 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Abcd3P55096 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Abcd3P55096 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.46■□□□□ 0.39
Abcd3P55096 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Abcd3P55096 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Abcd3P55096 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.45■□□□□ 0.38
Abcd3P55096 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Abcd3P55096 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Abcd3P55096 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Abcd3P55096 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Abcd3P55096 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Abcd3P55096 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Abcd3P55096 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.44■□□□□ 0.38
Abcd3P55096 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Abcd3P55096 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Abcd3P55096 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Abcd3P55096 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Abcd3P55096 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.44■□□□□ 0.38
Abcd3P55096 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.44■□□□□ 0.38
Abcd3P55096 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Abcd3P55096 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Abcd3P55096 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Abcd3P55096 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.44■□□□□ 0.38
Abcd3P55096 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.44■□□□□ 0.38
Abcd3P55096 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Abcd3P55096 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Abcd3P55096 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Abcd3P55096 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.43■□□□□ 0.38
Abcd3P55096 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.43■□□□□ 0.38
Abcd3P55096 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.43■□□□□ 0.38
Abcd3P55096 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Abcd3P55096 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.43■□□□□ 0.38
Abcd3P55096 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.43■□□□□ 0.38
Abcd3P55096 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Abcd3P55096 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Abcd3P55096 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Abcd3P55096 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Abcd3P55096 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.42■□□□□ 0.38
Abcd3P55096 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Abcd3P55096 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Abcd3P55096 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Abcd3P55096 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Abcd3P55096 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Abcd3P55096 Gm21956-201ENSMUST00000179946 522 ntBASIC17.42■□□□□ 0.38
Abcd3P55096 Gm13241-201ENSMUST00000094493 780 ntBASIC17.42■□□□□ 0.38
Abcd3P55096 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Abcd3P55096 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Abcd3P55096 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Abcd3P55096 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Abcd3P55096 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Abcd3P55096 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Abcd3P55096 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Abcd3P55096 Gm43137-201ENSMUST00000198052 594 ntBASIC17.41■□□□□ 0.38
Abcd3P55096 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.41■□□□□ 0.38
Abcd3P55096 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Abcd3P55096 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Abcd3P55096 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Abcd3P55096 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Abcd3P55096 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Abcd3P55096 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.4■□□□□ 0.38
Abcd3P55096 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Abcd3P55096 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Abcd3P55096 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Abcd3P55096 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.4■□□□□ 0.38
Abcd3P55096 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Abcd3P55096 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Abcd3P55096 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.39■□□□□ 0.37
Abcd3P55096 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Abcd3P55096 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Abcd3P55096 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Abcd3P55096 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Abcd3P55096 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Abcd3P55096 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms