Protein–RNA interactions for Protein: P53668

Limk1, LIM domain kinase 1, mousemouse

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk1P53668 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Limk1P53668 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Limk1P53668 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Limk1P53668 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Limk1P53668 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Limk1P53668 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Limk1P53668 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Limk1P53668 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Limk1P53668 Gm10812-201ENSMUST00000099864 546 ntBASIC19.14■□□□□ 0.65
Limk1P53668 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Limk1P53668 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.14■□□□□ 0.65
Limk1P53668 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Limk1P53668 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Limk1P53668 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Limk1P53668 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Limk1P53668 Gm7290-201ENSMUST00000104990 617 ntBASIC19.13■□□□□ 0.65
Limk1P53668 Gm12918-201ENSMUST00000120234 636 ntBASIC19.13■□□□□ 0.65
Limk1P53668 Gm15710-201ENSMUST00000121821 636 ntBASIC19.13■□□□□ 0.65
Limk1P53668 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Limk1P53668 Gm5075-201ENSMUST00000196916 622 ntBASIC19.13■□□□□ 0.65
Limk1P53668 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.13■□□□□ 0.65
Limk1P53668 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.13■□□□□ 0.65
Limk1P53668 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.13■□□□□ 0.65
Limk1P53668 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Limk1P53668 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Limk1P53668 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Limk1P53668 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Limk1P53668 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.13■□□□□ 0.65
Limk1P53668 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Limk1P53668 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Limk1P53668 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Limk1P53668 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Limk1P53668 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Limk1P53668 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
Limk1P53668 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Limk1P53668 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Limk1P53668 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Limk1P53668 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.12■□□□□ 0.65
Limk1P53668 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Limk1P53668 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Limk1P53668 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Limk1P53668 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Limk1P53668 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
Limk1P53668 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.12■□□□□ 0.65
Limk1P53668 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Limk1P53668 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Limk1P53668 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Limk1P53668 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Limk1P53668 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Limk1P53668 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Limk1P53668 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Limk1P53668 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Limk1P53668 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.11■□□□□ 0.65
Limk1P53668 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.11■□□□□ 0.65
Limk1P53668 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.11■□□□□ 0.65
Limk1P53668 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Limk1P53668 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Limk1P53668 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Limk1P53668 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Limk1P53668 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Limk1P53668 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Limk1P53668 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
Limk1P53668 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.1■□□□□ 0.65
Limk1P53668 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Limk1P53668 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Limk1P53668 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Limk1P53668 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Limk1P53668 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Limk1P53668 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.1■□□□□ 0.65
Limk1P53668 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Limk1P53668 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Limk1P53668 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
Limk1P53668 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Limk1P53668 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Limk1P53668 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Limk1P53668 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.09■□□□□ 0.65
Limk1P53668 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.09■□□□□ 0.65
Limk1P53668 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.09■□□□□ 0.65
Limk1P53668 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Limk1P53668 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Limk1P53668 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Limk1P53668 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Limk1P53668 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Limk1P53668 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Limk1P53668 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Limk1P53668 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Limk1P53668 Gm5408-201ENSMUST00000197998 747 ntBASIC19.08■□□□□ 0.64
Limk1P53668 Gm20049-201ENSMUST00000219950 730 ntBASIC19.08■□□□□ 0.64
Limk1P53668 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.08■□□□□ 0.64
Limk1P53668 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.08■□□□□ 0.64
Limk1P53668 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Limk1P53668 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Limk1P53668 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Limk1P53668 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Limk1P53668 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Limk1P53668 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Limk1P53668 Gm13148-201ENSMUST00000118892 745 ntBASIC19.07■□□□□ 0.64
Limk1P53668 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Limk1P53668 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Limk1P53668 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms