Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.93■□□□□ 0.78
Lhx3P50481 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
Lhx3P50481 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lhx3P50481 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lhx3P50481 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lhx3P50481 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Lhx3P50481 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lhx3P50481 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lhx3P50481 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.92■□□□□ 0.78
Lhx3P50481 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lhx3P50481 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Lhx3P50481 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Lhx3P50481 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Lhx3P50481 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lhx3P50481 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.92■□□□□ 0.78
Lhx3P50481 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lhx3P50481 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lhx3P50481 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lhx3P50481 Gm27801-201ENSMUST00000184174 223 ntBASIC19.91■□□□□ 0.78
Lhx3P50481 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Lhx3P50481 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lhx3P50481 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lhx3P50481 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Lhx3P50481 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Lhx3P50481 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lhx3P50481 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lhx3P50481 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Lhx3P50481 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
Lhx3P50481 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.9■□□□□ 0.78
Lhx3P50481 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Lhx3P50481 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Lhx3P50481 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.9■□□□□ 0.78
Lhx3P50481 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Lhx3P50481 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lhx3P50481 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Lhx3P50481 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Lhx3P50481 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Lhx3P50481 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lhx3P50481 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Lhx3P50481 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Lhx3P50481 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.89■□□□□ 0.77
Lhx3P50481 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lhx3P50481 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lhx3P50481 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lhx3P50481 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lhx3P50481 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lhx3P50481 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Lhx3P50481 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lhx3P50481 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lhx3P50481 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lhx3P50481 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.89■□□□□ 0.77
Lhx3P50481 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.88■□□□□ 0.77
Lhx3P50481 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.88■□□□□ 0.77
Lhx3P50481 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.88■□□□□ 0.77
Lhx3P50481 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lhx3P50481 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lhx3P50481 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.88■□□□□ 0.77
Lhx3P50481 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Lhx3P50481 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lhx3P50481 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
Lhx3P50481 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Lhx3P50481 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
Lhx3P50481 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lhx3P50481 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.87■□□□□ 0.77
Lhx3P50481 Gm18284-201ENSMUST00000172604 624 ntBASIC19.87■□□□□ 0.77
Lhx3P50481 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.87■□□□□ 0.77
Lhx3P50481 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.87■□□□□ 0.77
Lhx3P50481 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Lhx3P50481 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lhx3P50481 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lhx3P50481 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lhx3P50481 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lhx3P50481 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lhx3P50481 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.86■□□□□ 0.77
Lhx3P50481 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lhx3P50481 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Lhx3P50481 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.86■□□□□ 0.77
Lhx3P50481 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lhx3P50481 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Lhx3P50481 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.86■□□□□ 0.77
Lhx3P50481 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lhx3P50481 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lhx3P50481 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Lhx3P50481 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lhx3P50481 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Lhx3P50481 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Lhx3P50481 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lhx3P50481 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lhx3P50481 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
Lhx3P50481 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.85■□□□□ 0.77
Lhx3P50481 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lhx3P50481 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lhx3P50481 Gm10493-201ENSMUST00000097270 612 ntBASIC19.84■□□□□ 0.77
Lhx3P50481 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lhx3P50481 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Lhx3P50481 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Lhx3P50481 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lhx3P50481 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lhx3P50481 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.83■□□□□ 0.77
Lhx3P50481 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms