Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Prox1P48437 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prox1P48437 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.65■□□□□ 0.58
Prox1P48437 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prox1P48437 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Prox1P48437 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Prox1P48437 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prox1P48437 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Prox1P48437 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Prox1P48437 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.65■□□□□ 0.58
Prox1P48437 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Prox1P48437 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prox1P48437 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prox1P48437 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.64■□□□□ 0.57
Prox1P48437 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.64■□□□□ 0.57
Prox1P48437 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.64■□□□□ 0.57
Prox1P48437 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Prox1P48437 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prox1P48437 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prox1P48437 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prox1P48437 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prox1P48437 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Prox1P48437 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prox1P48437 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.63■□□□□ 0.57
Prox1P48437 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.63■□□□□ 0.57
Prox1P48437 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prox1P48437 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Prox1P48437 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
Prox1P48437 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prox1P48437 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Prox1P48437 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Prox1P48437 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Prox1P48437 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Prox1P48437 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prox1P48437 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prox1P48437 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prox1P48437 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prox1P48437 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prox1P48437 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Prox1P48437 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.62■□□□□ 0.57
Prox1P48437 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prox1P48437 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.62■□□□□ 0.57
Prox1P48437 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prox1P48437 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prox1P48437 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prox1P48437 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Prox1P48437 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Prox1P48437 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Prox1P48437 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prox1P48437 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prox1P48437 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Prox1P48437 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.61■□□□□ 0.57
Prox1P48437 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.61■□□□□ 0.57
Prox1P48437 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Prox1P48437 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Prox1P48437 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Prox1P48437 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Prox1P48437 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prox1P48437 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prox1P48437 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Prox1P48437 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Prox1P48437 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prox1P48437 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prox1P48437 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Prox1P48437 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prox1P48437 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prox1P48437 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.6■□□□□ 0.57
Prox1P48437 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.6■□□□□ 0.57
Prox1P48437 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prox1P48437 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prox1P48437 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prox1P48437 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prox1P48437 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prox1P48437 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Prox1P48437 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prox1P48437 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.6■□□□□ 0.57
Prox1P48437 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Prox1P48437 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prox1P48437 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Prox1P48437 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prox1P48437 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prox1P48437 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Prox1P48437 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prox1P48437 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
Prox1P48437 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prox1P48437 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Prox1P48437 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Prox1P48437 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.57
Prox1P48437 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.58■□□□□ 0.57
Prox1P48437 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Prox1P48437 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Prox1P48437 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Prox1P48437 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
Prox1P48437 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Prox1P48437 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Prox1P48437 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
Prox1P48437 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Prox1P48437 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prox1P48437 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prox1P48437 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms