Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tnfsf9P41274 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Tnfsf9P41274 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Tnfsf9P41274 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Tnfsf9P41274 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.71■□□□□ 0.59
Tnfsf9P41274 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.71■□□□□ 0.59
Tnfsf9P41274 Gm42569-201ENSMUST00000200539 472 ntBASIC18.71■□□□□ 0.59
Tnfsf9P41274 Gm18671-201ENSMUST00000214826 683 ntBASIC18.71■□□□□ 0.59
Tnfsf9P41274 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
Tnfsf9P41274 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tnfsf9P41274 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.71■□□□□ 0.59
Tnfsf9P41274 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Tnfsf9P41274 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.71■□□□□ 0.58
Tnfsf9P41274 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tnfsf9P41274 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.7■□□□□ 0.58
Tnfsf9P41274 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.7■□□□□ 0.58
Tnfsf9P41274 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.7■□□□□ 0.58
Tnfsf9P41274 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tnfsf9P41274 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tnfsf9P41274 Gm9988-201ENSMUST00000069786 435 ntBASIC18.7■□□□□ 0.58
Tnfsf9P41274 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tnfsf9P41274 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tnfsf9P41274 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tnfsf9P41274 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tnfsf9P41274 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Tnfsf9P41274 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Tnfsf9P41274 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Tnfsf9P41274 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.69■□□□□ 0.58
Tnfsf9P41274 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tnfsf9P41274 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Tnfsf9P41274 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tnfsf9P41274 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfsf9P41274 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfsf9P41274 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfsf9P41274 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfsf9P41274 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfsf9P41274 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfsf9P41274 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfsf9P41274 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfsf9P41274 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Tnfsf9P41274 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfsf9P41274 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfsf9P41274 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfsf9P41274 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfsf9P41274 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfsf9P41274 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfsf9P41274 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfsf9P41274 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfsf9P41274 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.66■□□□□ 0.58
Tnfsf9P41274 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.66■□□□□ 0.58
Tnfsf9P41274 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfsf9P41274 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfsf9P41274 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfsf9P41274 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfsf9P41274 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfsf9P41274 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfsf9P41274 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Tnfsf9P41274 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.65■□□□□ 0.58
Tnfsf9P41274 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfsf9P41274 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.65■□□□□ 0.58
Tnfsf9P41274 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfsf9P41274 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.65■□□□□ 0.58
Tnfsf9P41274 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
Tnfsf9P41274 Gm26571-201ENSMUST00000181399 666 ntBASIC18.65■□□□□ 0.58
Tnfsf9P41274 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.65■□□□□ 0.58
Tnfsf9P41274 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfsf9P41274 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfsf9P41274 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.65■□□□□ 0.58
Tnfsf9P41274 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfsf9P41274 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tnfsf9P41274 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tnfsf9P41274 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Tnfsf9P41274 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tnfsf9P41274 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tnfsf9P41274 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Tnfsf9P41274 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tnfsf9P41274 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tnfsf9P41274 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tnfsf9P41274 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tnfsf9P41274 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tnfsf9P41274 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Tnfsf9P41274 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tnfsf9P41274 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tnfsf9P41274 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tnfsf9P41274 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Tnfsf9P41274 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tnfsf9P41274 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tnfsf9P41274 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.63■□□□□ 0.57
Tnfsf9P41274 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Tnfsf9P41274 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Tnfsf9P41274 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Tnfsf9P41274 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tnfsf9P41274 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tnfsf9P41274 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfsf9P41274 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfsf9P41274 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfsf9P41274 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.62■□□□□ 0.57
Tnfsf9P41274 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfsf9P41274 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfsf9P41274 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms