Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.73■□□□□ 0.43
Cd40P27512 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd40P27512 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd40P27512 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd40P27512 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd40P27512 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd40P27512 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Cd40P27512 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd40P27512 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd40P27512 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd40P27512 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd40P27512 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.73■□□□□ 0.43
Cd40P27512 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cd40P27512 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cd40P27512 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cd40P27512 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Cd40P27512 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.72■□□□□ 0.43
Cd40P27512 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cd40P27512 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.71■□□□□ 0.43
Cd40P27512 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cd40P27512 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cd40P27512 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cd40P27512 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Cd40P27512 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Cd40P27512 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cd40P27512 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cd40P27512 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cd40P27512 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.7■□□□□ 0.42
Cd40P27512 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Cd40P27512 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cd40P27512 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Cd40P27512 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cd40P27512 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Cd40P27512 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.7■□□□□ 0.42
Cd40P27512 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Cd40P27512 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cd40P27512 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cd40P27512 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cd40P27512 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cd40P27512 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cd40P27512 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cd40P27512 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cd40P27512 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.69■□□□□ 0.42
Cd40P27512 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cd40P27512 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cd40P27512 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Cd40P27512 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cd40P27512 Gm43017-201ENSMUST00000198296 752 ntBASIC17.69■□□□□ 0.42
Cd40P27512 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cd40P27512 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
Cd40P27512 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cd40P27512 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.69■□□□□ 0.42
Cd40P27512 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cd40P27512 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Cd40P27512 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Cd40P27512 Gm11421-201ENSMUST00000122124 294 ntBASIC17.68■□□□□ 0.42
Cd40P27512 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cd40P27512 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
Cd40P27512 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.68■□□□□ 0.42
Cd40P27512 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cd40P27512 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cd40P27512 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Cd40P27512 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cd40P27512 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cd40P27512 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cd40P27512 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cd40P27512 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.67■□□□□ 0.42
Cd40P27512 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.67■□□□□ 0.42
Cd40P27512 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cd40P27512 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.67■□□□□ 0.42
Cd40P27512 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cd40P27512 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Cd40P27512 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cd40P27512 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cd40P27512 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cd40P27512 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cd40P27512 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cd40P27512 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cd40P27512 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cd40P27512 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cd40P27512 Gm26833-201ENSMUST00000180899 440 ntBASIC17.66■□□□□ 0.42
Cd40P27512 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cd40P27512 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Cd40P27512 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cd40P27512 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cd40P27512 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cd40P27512 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Cd40P27512 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cd40P27512 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cd40P27512 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.65■□□□□ 0.42
Cd40P27512 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.65■□□□□ 0.42
Cd40P27512 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cd40P27512 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cd40P27512 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cd40P27512 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cd40P27512 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Cd40P27512 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.64■□□□□ 0.41
Cd40P27512 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Cd40P27512 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.64■□□□□ 0.41
Cd40P27512 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms