Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nfkb1P25799 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.11■□□□□ 0.81
Nfkb1P25799 Gm27801-201ENSMUST00000184174 223 ntBASIC20.11■□□□□ 0.81
Nfkb1P25799 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.11■□□□□ 0.81
Nfkb1P25799 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.11■□□□□ 0.81
Nfkb1P25799 AV356131-201ENSMUST00000206201 750 ntBASIC20.11■□□□□ 0.81
Nfkb1P25799 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.11■□□□□ 0.81
Nfkb1P25799 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Nfkb1P25799 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nfkb1P25799 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nfkb1P25799 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nfkb1P25799 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nfkb1P25799 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.1■□□□□ 0.81
Nfkb1P25799 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Nfkb1P25799 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Nfkb1P25799 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nfkb1P25799 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nfkb1P25799 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Nfkb1P25799 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nfkb1P25799 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nfkb1P25799 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nfkb1P25799 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nfkb1P25799 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nfkb1P25799 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.09■□□□□ 0.81
Nfkb1P25799 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nfkb1P25799 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nfkb1P25799 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.09■□□□□ 0.81
Nfkb1P25799 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Nfkb1P25799 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nfkb1P25799 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Nfkb1P25799 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Nfkb1P25799 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nfkb1P25799 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nfkb1P25799 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.08■□□□□ 0.81
Nfkb1P25799 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nfkb1P25799 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.08■□□□□ 0.81
Nfkb1P25799 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nfkb1P25799 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nfkb1P25799 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Nfkb1P25799 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nfkb1P25799 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nfkb1P25799 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.08■□□□□ 0.8
Nfkb1P25799 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nfkb1P25799 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Nfkb1P25799 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Nfkb1P25799 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nfkb1P25799 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Nfkb1P25799 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Nfkb1P25799 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nfkb1P25799 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nfkb1P25799 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.07■□□□□ 0.8
Nfkb1P25799 Gm37179-201ENSMUST00000194862 823 ntBASIC20.07■□□□□ 0.8
Nfkb1P25799 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
Nfkb1P25799 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Nfkb1P25799 Notumos-201ENSMUST00000151998 2659 ntBASIC20.07■□□□□ 0.8
Nfkb1P25799 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nfkb1P25799 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nfkb1P25799 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
Nfkb1P25799 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.06■□□□□ 0.8
Nfkb1P25799 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Nfkb1P25799 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Nfkb1P25799 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nfkb1P25799 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Nfkb1P25799 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nfkb1P25799 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.05■□□□□ 0.8
Nfkb1P25799 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nfkb1P25799 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nfkb1P25799 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nfkb1P25799 Reep4-203ENSMUST00000226563 1444 ntBASIC20.05■□□□□ 0.8
Nfkb1P25799 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.05■□□□□ 0.8
Nfkb1P25799 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nfkb1P25799 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nfkb1P25799 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.05■□□□□ 0.8
Nfkb1P25799 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nfkb1P25799 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nfkb1P25799 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Nfkb1P25799 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Nfkb1P25799 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nfkb1P25799 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Nfkb1P25799 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Nfkb1P25799 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.04■□□□□ 0.8
Nfkb1P25799 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Nfkb1P25799 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Nfkb1P25799 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Nfkb1P25799 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Nfkb1P25799 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nfkb1P25799 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nfkb1P25799 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nfkb1P25799 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.03■□□□□ 0.8
Nfkb1P25799 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Nfkb1P25799 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nfkb1P25799 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.03■□□□□ 0.8
Nfkb1P25799 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nfkb1P25799 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nfkb1P25799 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nfkb1P25799 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Nfkb1P25799 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Nfkb1P25799 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Nfkb1P25799 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.02■□□□□ 0.8
Nfkb1P25799 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms