Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Gm43173-201ENSMUST00000202246 593 ntBASIC17■□□□□ 0.31
PtcraP0C6B2 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17■□□□□ 0.31
PtcraP0C6B2 Serp2-204ENSMUST00000228055 705 ntBASIC17■□□□□ 0.31
PtcraP0C6B2 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PtcraP0C6B2 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17■□□□□ 0.31
PtcraP0C6B2 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PtcraP0C6B2 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PtcraP0C6B2 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PtcraP0C6B2 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PtcraP0C6B2 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PtcraP0C6B2 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PtcraP0C6B2 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PtcraP0C6B2 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC16.99■□□□□ 0.31
PtcraP0C6B2 Gm8493-201ENSMUST00000196881 489 ntBASIC16.99■□□□□ 0.31
PtcraP0C6B2 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PtcraP0C6B2 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
PtcraP0C6B2 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PtcraP0C6B2 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.99■□□□□ 0.31
PtcraP0C6B2 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PtcraP0C6B2 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PtcraP0C6B2 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PtcraP0C6B2 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PtcraP0C6B2 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PtcraP0C6B2 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC16.98■□□□□ 0.31
PtcraP0C6B2 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PtcraP0C6B2 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC16.98■□□□□ 0.31
PtcraP0C6B2 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
PtcraP0C6B2 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PtcraP0C6B2 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC16.98■□□□□ 0.31
PtcraP0C6B2 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PtcraP0C6B2 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PtcraP0C6B2 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.97■□□□□ 0.31
PtcraP0C6B2 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
PtcraP0C6B2 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PtcraP0C6B2 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PtcraP0C6B2 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PtcraP0C6B2 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PtcraP0C6B2 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PtcraP0C6B2 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PtcraP0C6B2 Gm6139-201ENSMUST00000079261 882 ntBASIC16.97■□□□□ 0.31
PtcraP0C6B2 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PtcraP0C6B2 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PtcraP0C6B2 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PtcraP0C6B2 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
PtcraP0C6B2 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PtcraP0C6B2 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PtcraP0C6B2 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PtcraP0C6B2 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PtcraP0C6B2 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.96■□□□□ 0.31
PtcraP0C6B2 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
PtcraP0C6B2 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PtcraP0C6B2 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.96■□□□□ 0.31
PtcraP0C6B2 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PtcraP0C6B2 Smad6-203ENSMUST00000179458 273 ntBASIC16.96■□□□□ 0.31
PtcraP0C6B2 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PtcraP0C6B2 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC16.96■□□□□ 0.31
PtcraP0C6B2 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PtcraP0C6B2 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PtcraP0C6B2 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC16.96■□□□□ 0.31
PtcraP0C6B2 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PtcraP0C6B2 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PtcraP0C6B2 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PtcraP0C6B2 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.95■□□□□ 0.3
PtcraP0C6B2 Gm45417-201ENSMUST00000209533 758 ntBASIC16.95■□□□□ 0.3
PtcraP0C6B2 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PtcraP0C6B2 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PtcraP0C6B2 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PtcraP0C6B2 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PtcraP0C6B2 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PtcraP0C6B2 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PtcraP0C6B2 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PtcraP0C6B2 AC165080.2-201ENSMUST00000217491 1530 ntBASIC16.94■□□□□ 0.3
PtcraP0C6B2 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PtcraP0C6B2 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PtcraP0C6B2 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PtcraP0C6B2 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PtcraP0C6B2 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PtcraP0C6B2 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PtcraP0C6B2 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PtcraP0C6B2 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PtcraP0C6B2 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
PtcraP0C6B2 Gm42911-201ENSMUST00000199360 1630 ntBASIC16.93■□□□□ 0.3
PtcraP0C6B2 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.93■□□□□ 0.3
PtcraP0C6B2 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PtcraP0C6B2 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.93■□□□□ 0.3
PtcraP0C6B2 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PtcraP0C6B2 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PtcraP0C6B2 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PtcraP0C6B2 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PtcraP0C6B2 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PtcraP0C6B2 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
PtcraP0C6B2 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PtcraP0C6B2 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PtcraP0C6B2 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PtcraP0C6B2 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PtcraP0C6B2 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PtcraP0C6B2 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PtcraP0C6B2 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
PtcraP0C6B2 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PtcraP0C6B2 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms