Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
P06344 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
P06344 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P06344 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P06344 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P06344 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
P06344 Gm11421-201ENSMUST00000122124 294 ntBASIC17.44■□□□□ 0.38
P06344 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
P06344 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.44■□□□□ 0.38
P06344 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.44■□□□□ 0.38
P06344 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
P06344 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
P06344 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
P06344 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
P06344 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.43■□□□□ 0.38
P06344 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
P06344 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
P06344 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
P06344 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
P06344 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P06344 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P06344 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P06344 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P06344 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P06344 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
P06344 Gm18284-201ENSMUST00000172604 624 ntBASIC17.42■□□□□ 0.38
P06344 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P06344 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
P06344 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
P06344 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P06344 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
P06344 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.41■□□□□ 0.38
P06344 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
P06344 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P06344 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P06344 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
P06344 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P06344 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P06344 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
P06344 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P06344 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P06344 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P06344 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P06344 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P06344 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
P06344 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.4■□□□□ 0.38
P06344 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
P06344 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
P06344 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.4■□□□□ 0.38
P06344 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
P06344 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.4■□□□□ 0.38
P06344 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.4■□□□□ 0.38
P06344 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.4■□□□□ 0.38
P06344 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
P06344 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
P06344 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
P06344 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
P06344 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
P06344 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.39■□□□□ 0.38
P06344 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
P06344 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
P06344 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
P06344 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
P06344 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
P06344 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
P06344 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
P06344 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
P06344 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
P06344 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.39■□□□□ 0.37
P06344 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
P06344 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.39■□□□□ 0.37
P06344 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
P06344 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
P06344 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
P06344 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
P06344 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
P06344 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.39■□□□□ 0.37
P06344 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
P06344 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
P06344 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
P06344 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.38■□□□□ 0.37
P06344 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
P06344 Gm8495-201ENSMUST00000188740 694 ntBASIC17.38■□□□□ 0.37
P06344 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
P06344 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
P06344 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
P06344 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
P06344 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.37■□□□□ 0.37
P06344 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
P06344 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
P06344 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
P06344 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
P06344 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
P06344 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
P06344 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
P06344 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.37■□□□□ 0.37
P06344 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
P06344 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
P06344 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
P06344 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms