Protein–RNA interactions for Protein: P06336

Ig epsilon chain C region, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06336 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
P06336 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
P06336 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
P06336 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
P06336 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
P06336 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
P06336 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
P06336 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.05■□□□□ 0.48
P06336 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
P06336 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.05■□□□□ 0.48
P06336 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
P06336 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
P06336 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
P06336 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
P06336 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
P06336 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
P06336 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
P06336 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
P06336 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.04■□□□□ 0.48
P06336 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
P06336 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
P06336 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
P06336 AA386476-201ENSMUST00000098781 1665 ntBASIC18.04■□□□□ 0.48
P06336 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
P06336 Smad6-203ENSMUST00000179458 273 ntBASIC18.04■□□□□ 0.48
P06336 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.04■□□□□ 0.48
P06336 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
P06336 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
P06336 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.04■□□□□ 0.48
P06336 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
P06336 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
P06336 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.03■□□□□ 0.48
P06336 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
P06336 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
P06336 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
P06336 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
P06336 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
P06336 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
P06336 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
P06336 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.03■□□□□ 0.48
P06336 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.03■□□□□ 0.48
P06336 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
P06336 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
P06336 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
P06336 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.03■□□□□ 0.48
P06336 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
P06336 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
P06336 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
P06336 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
P06336 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
P06336 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
P06336 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
P06336 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
P06336 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
P06336 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
P06336 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
P06336 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
P06336 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.01■□□□□ 0.47
P06336 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
P06336 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
P06336 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
P06336 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
P06336 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
P06336 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
P06336 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
P06336 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18■□□□□ 0.47
P06336 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
P06336 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
P06336 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
P06336 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
P06336 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
P06336 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
P06336 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
P06336 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
P06336 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
P06336 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
P06336 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
P06336 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
P06336 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
P06336 Gm26833-201ENSMUST00000180899 440 ntBASIC17.99■□□□□ 0.47
P06336 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
P06336 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.99■□□□□ 0.47
P06336 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
P06336 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
P06336 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
P06336 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
P06336 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
P06336 Gm11421-201ENSMUST00000122124 294 ntBASIC17.98■□□□□ 0.47
P06336 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
P06336 Serp2-204ENSMUST00000228055 705 ntBASIC17.98■□□□□ 0.47
P06336 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
P06336 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
P06336 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
P06336 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
P06336 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.98■□□□□ 0.47
P06336 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
P06336 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
P06336 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
P06336 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
P06336 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms