Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Matn4O89029 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.49■□□□□ 0.55
Matn4O89029 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Matn4O89029 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Matn4O89029 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Matn4O89029 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.49■□□□□ 0.55
Matn4O89029 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Matn4O89029 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Matn4O89029 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Matn4O89029 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.48■□□□□ 0.55
Matn4O89029 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Matn4O89029 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Matn4O89029 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Matn4O89029 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Matn4O89029 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Matn4O89029 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
Matn4O89029 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Matn4O89029 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Matn4O89029 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Matn4O89029 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Matn4O89029 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Matn4O89029 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Matn4O89029 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Matn4O89029 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Matn4O89029 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Matn4O89029 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Matn4O89029 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Matn4O89029 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Matn4O89029 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Matn4O89029 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Matn4O89029 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Matn4O89029 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Matn4O89029 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.46■□□□□ 0.55
Matn4O89029 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Matn4O89029 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.46■□□□□ 0.55
Matn4O89029 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Matn4O89029 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Matn4O89029 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.46■□□□□ 0.55
Matn4O89029 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Matn4O89029 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Matn4O89029 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Matn4O89029 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Matn4O89029 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Matn4O89029 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Matn4O89029 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Matn4O89029 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.45■□□□□ 0.54
Matn4O89029 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.45■□□□□ 0.54
Matn4O89029 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Matn4O89029 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Matn4O89029 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.45■□□□□ 0.54
Matn4O89029 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Matn4O89029 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Matn4O89029 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Matn4O89029 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Matn4O89029 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Matn4O89029 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Matn4O89029 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Matn4O89029 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.44■□□□□ 0.54
Matn4O89029 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.44■□□□□ 0.54
Matn4O89029 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Matn4O89029 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Matn4O89029 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.44■□□□□ 0.54
Matn4O89029 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Matn4O89029 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Matn4O89029 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.44■□□□□ 0.54
Matn4O89029 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.44■□□□□ 0.54
Matn4O89029 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Matn4O89029 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Matn4O89029 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Matn4O89029 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Matn4O89029 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Matn4O89029 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Matn4O89029 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Matn4O89029 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Matn4O89029 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Matn4O89029 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Matn4O89029 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Matn4O89029 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Matn4O89029 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Matn4O89029 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Matn4O89029 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.42■□□□□ 0.54
Matn4O89029 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.42■□□□□ 0.54
Matn4O89029 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Matn4O89029 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Matn4O89029 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Matn4O89029 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.41■□□□□ 0.54
Matn4O89029 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Matn4O89029 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Matn4O89029 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Matn4O89029 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Matn4O89029 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Matn4O89029 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Matn4O89029 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.41■□□□□ 0.54
Matn4O89029 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Matn4O89029 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Matn4O89029 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.41■□□□□ 0.54
Matn4O89029 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Matn4O89029 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Matn4O89029 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.4■□□□□ 0.54
Matn4O89029 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms