Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ShdO88834 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
ShdO88834 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
ShdO88834 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ShdO88834 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
ShdO88834 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20■□□□□ 0.79
ShdO88834 Gm45417-201ENSMUST00000209533 758 ntBASIC20■□□□□ 0.79
ShdO88834 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ShdO88834 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
ShdO88834 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ShdO88834 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20■□□□□ 0.79
ShdO88834 AA386476-201ENSMUST00000098781 1665 ntBASIC20■□□□□ 0.79
ShdO88834 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20■□□□□ 0.79
ShdO88834 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20■□□□□ 0.79
ShdO88834 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20■□□□□ 0.79
ShdO88834 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.99■□□□□ 0.79
ShdO88834 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
ShdO88834 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
ShdO88834 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ShdO88834 Spcs1-204ENSMUST00000226782 949 ntBASIC19.99■□□□□ 0.79
ShdO88834 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
ShdO88834 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ShdO88834 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ShdO88834 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
ShdO88834 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ShdO88834 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ShdO88834 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
ShdO88834 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ShdO88834 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ShdO88834 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.99■□□□□ 0.79
ShdO88834 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ShdO88834 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ShdO88834 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ShdO88834 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.98■□□□□ 0.79
ShdO88834 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
ShdO88834 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.98■□□□□ 0.79
ShdO88834 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ShdO88834 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
ShdO88834 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.98■□□□□ 0.79
ShdO88834 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
ShdO88834 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ShdO88834 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ShdO88834 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ShdO88834 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ShdO88834 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ShdO88834 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ShdO88834 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.97■□□□□ 0.79
ShdO88834 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ShdO88834 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ShdO88834 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
ShdO88834 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
ShdO88834 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ShdO88834 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.96■□□□□ 0.79
ShdO88834 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
ShdO88834 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ShdO88834 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ShdO88834 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
ShdO88834 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
ShdO88834 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ShdO88834 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ShdO88834 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ShdO88834 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
ShdO88834 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ShdO88834 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ShdO88834 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ShdO88834 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ShdO88834 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ShdO88834 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ShdO88834 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ShdO88834 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.94■□□□□ 0.78
ShdO88834 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
ShdO88834 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ShdO88834 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ShdO88834 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ShdO88834 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ShdO88834 Mir7075-201ENSMUST00000184187 82 ntBASIC19.94■□□□□ 0.78
ShdO88834 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.94■□□□□ 0.78
ShdO88834 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
ShdO88834 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ShdO88834 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ShdO88834 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ShdO88834 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
ShdO88834 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ShdO88834 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.93■□□□□ 0.78
ShdO88834 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ShdO88834 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ShdO88834 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ShdO88834 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ShdO88834 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
ShdO88834 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
ShdO88834 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.93■□□□□ 0.78
ShdO88834 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ShdO88834 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
ShdO88834 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ShdO88834 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ShdO88834 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ShdO88834 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ShdO88834 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
ShdO88834 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ShdO88834 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms