Protein–RNA interactions for Protein: O70479

Tnfaip1, BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip1O70479 Gm12527-201ENSMUST00000117967 564 ntBASIC20.72■□□□□ 0.91
Tnfaip1O70479 Gm6420-201ENSMUST00000193885 723 ntBASIC20.72■□□□□ 0.91
Tnfaip1O70479 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Tnfaip1O70479 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.72■□□□□ 0.91
Tnfaip1O70479 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tnfaip1O70479 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tnfaip1O70479 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tnfaip1O70479 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Tnfaip1O70479 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Tnfaip1O70479 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.72■□□□□ 0.91
Tnfaip1O70479 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.71■□□□□ 0.91
Tnfaip1O70479 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfaip1O70479 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfaip1O70479 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfaip1O70479 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfaip1O70479 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Tnfaip1O70479 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfaip1O70479 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfaip1O70479 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.7■□□□□ 0.91
Tnfaip1O70479 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfaip1O70479 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.7■□□□□ 0.9
Tnfaip1O70479 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.7■□□□□ 0.9
Tnfaip1O70479 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfaip1O70479 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfaip1O70479 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Tnfaip1O70479 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfaip1O70479 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Tnfaip1O70479 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.7■□□□□ 0.9
Tnfaip1O70479 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.7■□□□□ 0.9
Tnfaip1O70479 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfaip1O70479 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Tnfaip1O70479 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Tnfaip1O70479 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfaip1O70479 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.7■□□□□ 0.9
Tnfaip1O70479 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfaip1O70479 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfaip1O70479 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfaip1O70479 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Tnfaip1O70479 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.69■□□□□ 0.9
Tnfaip1O70479 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Tnfaip1O70479 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfaip1O70479 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.69■□□□□ 0.9
Tnfaip1O70479 Gm6211-202ENSMUST00000167849 925 ntBASIC20.69■□□□□ 0.9
Tnfaip1O70479 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfaip1O70479 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfaip1O70479 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfaip1O70479 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfaip1O70479 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnfaip1O70479 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnfaip1O70479 Gm13534-201ENSMUST00000121169 513 ntBASIC20.68■□□□□ 0.9
Tnfaip1O70479 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.68■□□□□ 0.9
Tnfaip1O70479 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.68■□□□□ 0.9
Tnfaip1O70479 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
Tnfaip1O70479 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnfaip1O70479 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Tnfaip1O70479 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnfaip1O70479 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfaip1O70479 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfaip1O70479 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfaip1O70479 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfaip1O70479 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfaip1O70479 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfaip1O70479 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfaip1O70479 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfaip1O70479 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Tnfaip1O70479 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.67■□□□□ 0.9
Tnfaip1O70479 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Tnfaip1O70479 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfaip1O70479 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.66■□□□□ 0.9
Tnfaip1O70479 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Tnfaip1O70479 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfaip1O70479 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Tnfaip1O70479 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfaip1O70479 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfaip1O70479 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfaip1O70479 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfaip1O70479 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfaip1O70479 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfaip1O70479 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfaip1O70479 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfaip1O70479 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfaip1O70479 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
Tnfaip1O70479 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfaip1O70479 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tnfaip1O70479 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnfaip1O70479 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnfaip1O70479 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnfaip1O70479 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Tnfaip1O70479 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnfaip1O70479 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.65■□□□□ 0.9
Tnfaip1O70479 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tnfaip1O70479 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnfaip1O70479 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnfaip1O70479 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tnfaip1O70479 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tnfaip1O70479 AA386476-201ENSMUST00000098781 1665 ntBASIC20.64■□□□□ 0.9
Tnfaip1O70479 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tnfaip1O70479 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnfaip1O70479 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnfaip1O70479 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms