Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Per2O54943 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Per2O54943 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Per2O54943 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Per2O54943 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
Per2O54943 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Per2O54943 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Per2O54943 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.35■□□□□ 0.85
Per2O54943 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
Per2O54943 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Per2O54943 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Per2O54943 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Per2O54943 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
Per2O54943 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.35■□□□□ 0.85
Per2O54943 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Per2O54943 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Per2O54943 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Per2O54943 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Per2O54943 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.35■□□□□ 0.85
Per2O54943 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Per2O54943 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Per2O54943 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Per2O54943 AA386476-201ENSMUST00000098781 1665 ntBASIC20.34■□□□□ 0.85
Per2O54943 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Per2O54943 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Per2O54943 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Per2O54943 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.33■□□□□ 0.85
Per2O54943 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Per2O54943 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.33■□□□□ 0.84
Per2O54943 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Per2O54943 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Per2O54943 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Per2O54943 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Per2O54943 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Per2O54943 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Per2O54943 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Per2O54943 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.32■□□□□ 0.84
Per2O54943 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Per2O54943 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Per2O54943 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Per2O54943 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Per2O54943 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Per2O54943 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Per2O54943 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Per2O54943 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Per2O54943 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Per2O54943 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Per2O54943 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.31■□□□□ 0.84
Per2O54943 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Per2O54943 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Per2O54943 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Per2O54943 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.3■□□□□ 0.84
Per2O54943 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Per2O54943 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Per2O54943 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.3■□□□□ 0.84
Per2O54943 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Per2O54943 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Per2O54943 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Per2O54943 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
Per2O54943 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Per2O54943 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Per2O54943 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Per2O54943 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Per2O54943 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Per2O54943 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Per2O54943 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Per2O54943 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Per2O54943 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Per2O54943 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Per2O54943 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Per2O54943 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.29■□□□□ 0.84
Per2O54943 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Per2O54943 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Per2O54943 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Per2O54943 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Per2O54943 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Per2O54943 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.28■□□□□ 0.84
Per2O54943 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Per2O54943 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Per2O54943 Gm13241-201ENSMUST00000094493 780 ntBASIC20.28■□□□□ 0.84
Per2O54943 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Per2O54943 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Per2O54943 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Per2O54943 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Per2O54943 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Per2O54943 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Per2O54943 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
Per2O54943 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.27■□□□□ 0.84
Per2O54943 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Per2O54943 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Per2O54943 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.27■□□□□ 0.83
Per2O54943 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Per2O54943 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Per2O54943 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.26■□□□□ 0.83
Per2O54943 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Per2O54943 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Per2O54943 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Per2O54943 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Per2O54943 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Per2O54943 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms