Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Limk2O54785 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Limk2O54785 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Limk2O54785 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.9■□□□□ 0.78
Limk2O54785 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Limk2O54785 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Limk2O54785 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Limk2O54785 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Limk2O54785 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.78
Limk2O54785 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Limk2O54785 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
Limk2O54785 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Limk2O54785 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Limk2O54785 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.89■□□□□ 0.77
Limk2O54785 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Limk2O54785 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Limk2O54785 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Limk2O54785 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.88■□□□□ 0.77
Limk2O54785 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.88■□□□□ 0.77
Limk2O54785 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.88■□□□□ 0.77
Limk2O54785 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Limk2O54785 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Limk2O54785 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Limk2O54785 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Limk2O54785 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Limk2O54785 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Limk2O54785 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Limk2O54785 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Limk2O54785 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Limk2O54785 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Limk2O54785 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Limk2O54785 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Limk2O54785 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Limk2O54785 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Limk2O54785 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Limk2O54785 Gm7291-201ENSMUST00000199147 382 ntBASIC19.86■□□□□ 0.77
Limk2O54785 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.86■□□□□ 0.77
Limk2O54785 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Limk2O54785 Gm10493-201ENSMUST00000097270 612 ntBASIC19.86■□□□□ 0.77
Limk2O54785 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.86■□□□□ 0.77
Limk2O54785 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Limk2O54785 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Limk2O54785 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Limk2O54785 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Limk2O54785 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Limk2O54785 Gm43060-201ENSMUST00000200621 289 ntBASIC19.85■□□□□ 0.77
Limk2O54785 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.85■□□□□ 0.77
Limk2O54785 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Limk2O54785 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Limk2O54785 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Limk2O54785 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Limk2O54785 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Limk2O54785 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Limk2O54785 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Limk2O54785 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.84■□□□□ 0.77
Limk2O54785 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Limk2O54785 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Limk2O54785 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Limk2O54785 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Limk2O54785 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.84■□□□□ 0.77
Limk2O54785 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.84■□□□□ 0.77
Limk2O54785 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Limk2O54785 AA386476-201ENSMUST00000098781 1665 ntBASIC19.84■□□□□ 0.77
Limk2O54785 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Limk2O54785 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Limk2O54785 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Limk2O54785 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Limk2O54785 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.83■□□□□ 0.77
Limk2O54785 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
Limk2O54785 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Limk2O54785 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Limk2O54785 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.83■□□□□ 0.76
Limk2O54785 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Limk2O54785 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Limk2O54785 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Limk2O54785 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Limk2O54785 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Limk2O54785 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Limk2O54785 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Limk2O54785 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Limk2O54785 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.82■□□□□ 0.76
Limk2O54785 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Limk2O54785 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Limk2O54785 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Limk2O54785 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Limk2O54785 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Limk2O54785 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Limk2O54785 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Limk2O54785 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.81■□□□□ 0.76
Limk2O54785 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.81■□□□□ 0.76
Limk2O54785 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.81■□□□□ 0.76
Limk2O54785 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Limk2O54785 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.81■□□□□ 0.76
Limk2O54785 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Limk2O54785 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Limk2O54785 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Limk2O54785 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Limk2O54785 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Limk2O54785 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Limk2O54785 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms