Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Npc1O35604 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Npc1O35604 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Npc1O35604 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.06■□□□□ 0.64
Npc1O35604 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Npc1O35604 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Npc1O35604 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Npc1O35604 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Npc1O35604 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.06■□□□□ 0.64
Npc1O35604 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
Npc1O35604 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Npc1O35604 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Npc1O35604 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Npc1O35604 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Npc1O35604 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Npc1O35604 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Npc1O35604 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Npc1O35604 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Npc1O35604 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.05■□□□□ 0.64
Npc1O35604 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Npc1O35604 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Npc1O35604 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.05■□□□□ 0.64
Npc1O35604 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Npc1O35604 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.04■□□□□ 0.64
Npc1O35604 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Npc1O35604 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Npc1O35604 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Npc1O35604 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Npc1O35604 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Npc1O35604 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Npc1O35604 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Npc1O35604 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Npc1O35604 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Npc1O35604 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.04■□□□□ 0.64
Npc1O35604 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Npc1O35604 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Npc1O35604 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Npc1O35604 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Npc1O35604 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Npc1O35604 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Npc1O35604 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Npc1O35604 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.03■□□□□ 0.64
Npc1O35604 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Npc1O35604 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Npc1O35604 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Npc1O35604 Gm43060-201ENSMUST00000200621 289 ntBASIC19.03■□□□□ 0.64
Npc1O35604 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Npc1O35604 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Npc1O35604 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Npc1O35604 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Npc1O35604 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Npc1O35604 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Npc1O35604 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Npc1O35604 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Npc1O35604 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Npc1O35604 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.02■□□□□ 0.64
Npc1O35604 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.02■□□□□ 0.64
Npc1O35604 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Npc1O35604 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Npc1O35604 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Npc1O35604 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Npc1O35604 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Npc1O35604 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Npc1O35604 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Npc1O35604 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
Npc1O35604 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.01■□□□□ 0.63
Npc1O35604 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Npc1O35604 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Npc1O35604 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Npc1O35604 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Npc1O35604 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Npc1O35604 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.01■□□□□ 0.63
Npc1O35604 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Npc1O35604 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Npc1O35604 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Npc1O35604 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
Npc1O35604 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Npc1O35604 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
Npc1O35604 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Npc1O35604 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
Npc1O35604 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Npc1O35604 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Npc1O35604 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Npc1O35604 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Npc1O35604 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Npc1O35604 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Npc1O35604 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Npc1O35604 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Npc1O35604 Gm18284-201ENSMUST00000172604 624 ntBASIC19■□□□□ 0.63
Npc1O35604 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19■□□□□ 0.63
Npc1O35604 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Npc1O35604 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19■□□□□ 0.63
Npc1O35604 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19■□□□□ 0.63
Npc1O35604 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19■□□□□ 0.63
Npc1O35604 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Npc1O35604 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Npc1O35604 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Npc1O35604 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Npc1O35604 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.99■□□□□ 0.63
Npc1O35604 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms