Protein–RNA interactions for Protein: O35305

Tnfrsf11a, Tumor necrosis factor receptor superfamily member 11A, mousemouse

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11aO35305 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.15■□□□□ 0.98
Tnfrsf11aO35305 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tnfrsf11aO35305 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tnfrsf11aO35305 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Tnfrsf11aO35305 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Tnfrsf11aO35305 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Tnfrsf11aO35305 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tnfrsf11aO35305 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Tnfrsf11aO35305 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Tnfrsf11aO35305 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tnfrsf11aO35305 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
Tnfrsf11aO35305 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Tnfrsf11aO35305 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Tnfrsf11aO35305 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Tnfrsf11aO35305 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tnfrsf11aO35305 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tnfrsf11aO35305 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Tnfrsf11aO35305 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tnfrsf11aO35305 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tnfrsf11aO35305 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tnfrsf11aO35305 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.13■□□□□ 0.97
Tnfrsf11aO35305 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Tnfrsf11aO35305 Gm43017-201ENSMUST00000198296 752 ntBASIC21.13■□□□□ 0.97
Tnfrsf11aO35305 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC21.13■□□□□ 0.97
Tnfrsf11aO35305 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tnfrsf11aO35305 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Tnfrsf11aO35305 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Tnfrsf11aO35305 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tnfrsf11aO35305 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Tnfrsf11aO35305 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tnfrsf11aO35305 Smad6-203ENSMUST00000179458 273 ntBASIC21.12■□□□□ 0.97
Tnfrsf11aO35305 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tnfrsf11aO35305 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Tnfrsf11aO35305 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Tnfrsf11aO35305 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Tnfrsf11aO35305 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Tnfrsf11aO35305 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tnfrsf11aO35305 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Tnfrsf11aO35305 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tnfrsf11aO35305 Gm42911-201ENSMUST00000199360 1630 ntBASIC21.11■□□□□ 0.97
Tnfrsf11aO35305 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tnfrsf11aO35305 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Tnfrsf11aO35305 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC21.11■□□□□ 0.97
Tnfrsf11aO35305 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC21.11■□□□□ 0.97
Tnfrsf11aO35305 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.11■□□□□ 0.97
Tnfrsf11aO35305 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Tnfrsf11aO35305 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tnfrsf11aO35305 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tnfrsf11aO35305 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tnfrsf11aO35305 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tnfrsf11aO35305 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.1■□□□□ 0.97
Tnfrsf11aO35305 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tnfrsf11aO35305 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tnfrsf11aO35305 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tnfrsf11aO35305 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tnfrsf11aO35305 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Tnfrsf11aO35305 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Tnfrsf11aO35305 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Tnfrsf11aO35305 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tnfrsf11aO35305 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Tnfrsf11aO35305 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tnfrsf11aO35305 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Tnfrsf11aO35305 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tnfrsf11aO35305 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tnfrsf11aO35305 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tnfrsf11aO35305 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tnfrsf11aO35305 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Tnfrsf11aO35305 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tnfrsf11aO35305 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tnfrsf11aO35305 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tnfrsf11aO35305 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Tnfrsf11aO35305 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Tnfrsf11aO35305 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Tnfrsf11aO35305 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21.07■□□□□ 0.96
Tnfrsf11aO35305 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tnfrsf11aO35305 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Tnfrsf11aO35305 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Tnfrsf11aO35305 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Tnfrsf11aO35305 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Tnfrsf11aO35305 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tnfrsf11aO35305 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tnfrsf11aO35305 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Tnfrsf11aO35305 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21.06■□□□□ 0.96
Tnfrsf11aO35305 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Tnfrsf11aO35305 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC21.06■□□□□ 0.96
Tnfrsf11aO35305 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.06■□□□□ 0.96
Tnfrsf11aO35305 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Tnfrsf11aO35305 Gm2011-201ENSMUST00000203124 1263 ntBASIC21.06■□□□□ 0.96
Tnfrsf11aO35305 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Tnfrsf11aO35305 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC21.06■□□□□ 0.96
Tnfrsf11aO35305 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tnfrsf11aO35305 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
Tnfrsf11aO35305 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tnfrsf11aO35305 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Tnfrsf11aO35305 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tnfrsf11aO35305 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tnfrsf11aO35305 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tnfrsf11aO35305 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
Tnfrsf11aO35305 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tnfrsf11aO35305 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms