Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cx3cl1O35188 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cx3cl1O35188 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cx3cl1O35188 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Cx3cl1O35188 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cx3cl1O35188 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Cx3cl1O35188 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cx3cl1O35188 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Cx3cl1O35188 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cx3cl1O35188 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cx3cl1O35188 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cx3cl1O35188 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cx3cl1O35188 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cx3cl1O35188 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Cx3cl1O35188 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Cx3cl1O35188 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Cx3cl1O35188 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.31■□□□□ 0.52
Cx3cl1O35188 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cx3cl1O35188 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cx3cl1O35188 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.31■□□□□ 0.52
Cx3cl1O35188 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Cx3cl1O35188 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cx3cl1O35188 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cx3cl1O35188 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cx3cl1O35188 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cx3cl1O35188 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cx3cl1O35188 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cx3cl1O35188 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cx3cl1O35188 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cx3cl1O35188 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.3■□□□□ 0.52
Cx3cl1O35188 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cx3cl1O35188 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cx3cl1O35188 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cx3cl1O35188 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Cx3cl1O35188 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Cx3cl1O35188 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.3■□□□□ 0.52
Cx3cl1O35188 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cx3cl1O35188 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Cx3cl1O35188 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cx3cl1O35188 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.29■□□□□ 0.52
Cx3cl1O35188 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.29■□□□□ 0.52
Cx3cl1O35188 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cx3cl1O35188 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
Cx3cl1O35188 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cx3cl1O35188 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cx3cl1O35188 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.29■□□□□ 0.52
Cx3cl1O35188 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cx3cl1O35188 Smad6-203ENSMUST00000179458 273 ntBASIC18.29■□□□□ 0.52
Cx3cl1O35188 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cx3cl1O35188 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cx3cl1O35188 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Cx3cl1O35188 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cx3cl1O35188 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cx3cl1O35188 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Cx3cl1O35188 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cx3cl1O35188 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cx3cl1O35188 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Cx3cl1O35188 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cx3cl1O35188 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.28■□□□□ 0.52
Cx3cl1O35188 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.28■□□□□ 0.52
Cx3cl1O35188 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Cx3cl1O35188 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cx3cl1O35188 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cx3cl1O35188 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cx3cl1O35188 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.28■□□□□ 0.52
Cx3cl1O35188 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Cx3cl1O35188 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.28■□□□□ 0.52
Cx3cl1O35188 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cx3cl1O35188 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cx3cl1O35188 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cx3cl1O35188 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cx3cl1O35188 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cx3cl1O35188 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Cx3cl1O35188 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.27■□□□□ 0.52
Cx3cl1O35188 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.27■□□□□ 0.52
Cx3cl1O35188 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cx3cl1O35188 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cx3cl1O35188 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Cx3cl1O35188 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cx3cl1O35188 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cx3cl1O35188 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Cx3cl1O35188 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.26■□□□□ 0.51
Cx3cl1O35188 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cx3cl1O35188 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Cx3cl1O35188 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cx3cl1O35188 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cx3cl1O35188 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Cx3cl1O35188 Gm26833-201ENSMUST00000180899 440 ntBASIC18.26■□□□□ 0.51
Cx3cl1O35188 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cx3cl1O35188 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
Cx3cl1O35188 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cx3cl1O35188 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cx3cl1O35188 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.25■□□□□ 0.51
Cx3cl1O35188 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cx3cl1O35188 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cx3cl1O35188 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Cx3cl1O35188 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cx3cl1O35188 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cx3cl1O35188 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.24■□□□□ 0.51
Cx3cl1O35188 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms