Protein–RNA interactions for Protein: O09061

Psmb1, Proteasome subunit beta type-1, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Psmb1O09061 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Psmb1O09061 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.72■□□□□ 0.43
Psmb1O09061 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Psmb1O09061 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Psmb1O09061 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Psmb1O09061 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Psmb1O09061 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Psmb1O09061 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Psmb1O09061 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.72■□□□□ 0.43
Psmb1O09061 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.72■□□□□ 0.43
Psmb1O09061 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.72■□□□□ 0.43
Psmb1O09061 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.72■□□□□ 0.43
Psmb1O09061 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Psmb1O09061 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.72■□□□□ 0.43
Psmb1O09061 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Psmb1O09061 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Psmb1O09061 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Psmb1O09061 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Psmb1O09061 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Psmb1O09061 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Psmb1O09061 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
Psmb1O09061 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Psmb1O09061 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Psmb1O09061 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Psmb1O09061 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Psmb1O09061 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
Psmb1O09061 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.71■□□□□ 0.42
Psmb1O09061 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Psmb1O09061 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.7■□□□□ 0.42
Psmb1O09061 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Psmb1O09061 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Psmb1O09061 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Psmb1O09061 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Psmb1O09061 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Psmb1O09061 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Psmb1O09061 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Psmb1O09061 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Psmb1O09061 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.69■□□□□ 0.42
Psmb1O09061 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.69■□□□□ 0.42
Psmb1O09061 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Psmb1O09061 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.69■□□□□ 0.42
Psmb1O09061 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.69■□□□□ 0.42
Psmb1O09061 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.69■□□□□ 0.42
Psmb1O09061 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Psmb1O09061 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Psmb1O09061 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Psmb1O09061 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Psmb1O09061 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Psmb1O09061 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Psmb1O09061 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Psmb1O09061 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Psmb1O09061 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Psmb1O09061 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Psmb1O09061 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Psmb1O09061 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Psmb1O09061 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Psmb1O09061 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Psmb1O09061 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Psmb1O09061 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Psmb1O09061 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Psmb1O09061 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Psmb1O09061 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Psmb1O09061 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Psmb1O09061 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.67■□□□□ 0.42
Psmb1O09061 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Psmb1O09061 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Psmb1O09061 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.67■□□□□ 0.42
Psmb1O09061 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Psmb1O09061 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Psmb1O09061 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Psmb1O09061 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Psmb1O09061 Golph3-202ENSMUST00000226517 2359 ntBASIC17.66■□□□□ 0.42
Psmb1O09061 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Psmb1O09061 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Psmb1O09061 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Psmb1O09061 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Psmb1O09061 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Psmb1O09061 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Psmb1O09061 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.66■□□□□ 0.42
Psmb1O09061 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Psmb1O09061 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.65■□□□□ 0.42
Psmb1O09061 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Psmb1O09061 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Psmb1O09061 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Psmb1O09061 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Psmb1O09061 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Psmb1O09061 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Psmb1O09061 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Psmb1O09061 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Psmb1O09061 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Psmb1O09061 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Psmb1O09061 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Psmb1O09061 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Psmb1O09061 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Psmb1O09061 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.64■□□□□ 0.41
Psmb1O09061 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Psmb1O09061 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Psmb1O09061 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Psmb1O09061 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Psmb1O09061 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms