Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Gm3139J3QK78 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gm3139J3QK78 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gm3139J3QK78 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gm3139J3QK78 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Gm3139J3QK78 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gm3139J3QK78 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Gm3139J3QK78 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm3139J3QK78 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.54■□□□□ 0.72
Gm3139J3QK78 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Gm3139J3QK78 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.54■□□□□ 0.72
Gm3139J3QK78 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
Gm3139J3QK78 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm3139J3QK78 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.54■□□□□ 0.72
Gm3139J3QK78 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.54■□□□□ 0.72
Gm3139J3QK78 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm3139J3QK78 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.53■□□□□ 0.72
Gm3139J3QK78 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm3139J3QK78 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm3139J3QK78 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Gm3139J3QK78 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm3139J3QK78 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Gm3139J3QK78 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm3139J3QK78 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm3139J3QK78 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm3139J3QK78 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm3139J3QK78 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.52■□□□□ 0.72
Gm3139J3QK78 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gm3139J3QK78 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gm3139J3QK78 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gm3139J3QK78 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Gm3139J3QK78 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Gm3139J3QK78 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gm3139J3QK78 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gm3139J3QK78 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gm3139J3QK78 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gm3139J3QK78 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Gm3139J3QK78 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm3139J3QK78 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.51■□□□□ 0.71
Gm3139J3QK78 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm3139J3QK78 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm3139J3QK78 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.51■□□□□ 0.71
Gm3139J3QK78 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.51■□□□□ 0.71
Gm3139J3QK78 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm3139J3QK78 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm3139J3QK78 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.51■□□□□ 0.71
Gm3139J3QK78 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm3139J3QK78 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm3139J3QK78 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm3139J3QK78 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Gm3139J3QK78 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.5■□□□□ 0.71
Gm3139J3QK78 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.5■□□□□ 0.71
Gm3139J3QK78 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.5■□□□□ 0.71
Gm3139J3QK78 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm3139J3QK78 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm3139J3QK78 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Gm3139J3QK78 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Gm3139J3QK78 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Gm3139J3QK78 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.49■□□□□ 0.71
Gm3139J3QK78 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.49■□□□□ 0.71
Gm3139J3QK78 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.49■□□□□ 0.71
Gm3139J3QK78 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm3139J3QK78 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm3139J3QK78 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm3139J3QK78 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm3139J3QK78 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm3139J3QK78 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.49■□□□□ 0.71
Gm3139J3QK78 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm3139J3QK78 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Gm3139J3QK78 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm3139J3QK78 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
Gm3139J3QK78 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm3139J3QK78 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
Gm3139J3QK78 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Gm3139J3QK78 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm3139J3QK78 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm3139J3QK78 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm3139J3QK78 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Gm3139J3QK78 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.47■□□□□ 0.71
Gm3139J3QK78 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm3139J3QK78 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm3139J3QK78 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm3139J3QK78 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm3139J3QK78 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm3139J3QK78 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Gm3139J3QK78 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Gm3139J3QK78 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm3139J3QK78 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Gm3139J3QK78 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm3139J3QK78 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Gm3139J3QK78 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm3139J3QK78 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm3139J3QK78 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.46■□□□□ 0.71
Gm3139J3QK78 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.46■□□□□ 0.71
Gm3139J3QK78 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm3139J3QK78 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm3139J3QK78 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Gm3139J3QK78 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Gm3139J3QK78 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm3139J3QK78 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms