Protein–RNA interactions for Protein: H3BKF4

Gm20708, Predicted gene 20708, mousemouse

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm20708H3BKF4 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
Gm20708H3BKF4 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Gm20708H3BKF4 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.47■□□□□ 0.23
Gm20708H3BKF4 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Gm20708H3BKF4 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Gm20708H3BKF4 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Gm20708H3BKF4 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Gm20708H3BKF4 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Gm20708H3BKF4 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Gm20708H3BKF4 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Gm20708H3BKF4 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Gm20708H3BKF4 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Gm20708H3BKF4 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Gm20708H3BKF4 Gm42911-201ENSMUST00000199360 1630 ntBASIC16.46■□□□□ 0.23
Gm20708H3BKF4 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Gm20708H3BKF4 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Gm20708H3BKF4 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Gm20708H3BKF4 Smad6-203ENSMUST00000179458 273 ntBASIC16.46■□□□□ 0.23
Gm20708H3BKF4 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Gm20708H3BKF4 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Gm20708H3BKF4 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Gm20708H3BKF4 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC16.46■□□□□ 0.23
Gm20708H3BKF4 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC16.46■□□□□ 0.23
Gm20708H3BKF4 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Gm20708H3BKF4 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Gm20708H3BKF4 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Gm20708H3BKF4 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Gm20708H3BKF4 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Gm20708H3BKF4 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Gm20708H3BKF4 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Gm20708H3BKF4 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Gm20708H3BKF4 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
Gm20708H3BKF4 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
Gm20708H3BKF4 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm20708H3BKF4 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm20708H3BKF4 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm20708H3BKF4 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Gm20708H3BKF4 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm20708H3BKF4 Gm43017-201ENSMUST00000198296 752 ntBASIC16.45■□□□□ 0.22
Gm20708H3BKF4 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC16.45■□□□□ 0.22
Gm20708H3BKF4 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm20708H3BKF4 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm20708H3BKF4 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Gm20708H3BKF4 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm20708H3BKF4 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm20708H3BKF4 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm20708H3BKF4 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.45■□□□□ 0.22
Gm20708H3BKF4 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm20708H3BKF4 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Gm20708H3BKF4 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm20708H3BKF4 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Gm20708H3BKF4 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Gm20708H3BKF4 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm20708H3BKF4 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm20708H3BKF4 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm20708H3BKF4 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm20708H3BKF4 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm20708H3BKF4 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm20708H3BKF4 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Gm20708H3BKF4 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.43■□□□□ 0.22
Gm20708H3BKF4 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Gm20708H3BKF4 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm20708H3BKF4 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm20708H3BKF4 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Gm20708H3BKF4 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.42■□□□□ 0.22
Gm20708H3BKF4 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm20708H3BKF4 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Gm20708H3BKF4 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm20708H3BKF4 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm20708H3BKF4 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm20708H3BKF4 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm20708H3BKF4 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm20708H3BKF4 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
Gm20708H3BKF4 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC16.41■□□□□ 0.22
Gm20708H3BKF4 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Gm20708H3BKF4 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Gm20708H3BKF4 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm20708H3BKF4 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Gm20708H3BKF4 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Gm20708H3BKF4 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm20708H3BKF4 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Gm20708H3BKF4 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.4■□□□□ 0.22
Gm20708H3BKF4 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Gm20708H3BKF4 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.4■□□□□ 0.22
Gm20708H3BKF4 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Gm20708H3BKF4 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm20708H3BKF4 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm20708H3BKF4 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm20708H3BKF4 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Gm20708H3BKF4 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Gm20708H3BKF4 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Gm20708H3BKF4 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Gm20708H3BKF4 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Gm20708H3BKF4 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm20708H3BKF4 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm20708H3BKF4 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Gm20708H3BKF4 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm20708H3BKF4 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm20708H3BKF4 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC16.39■□□□□ 0.21
Gm20708H3BKF4 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms