Protein–RNA interactions for Protein: A0A0J9YTW6

Scn2a, Sodium channel protein, mousemouse

Predictions only

Length 2,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2aA0A0J9YTW6 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scn2aA0A0J9YTW6 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Scn2aA0A0J9YTW6 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.01■□□□□ 0.47
Scn2aA0A0J9YTW6 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.01■□□□□ 0.47
Scn2aA0A0J9YTW6 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scn2aA0A0J9YTW6 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Scn2aA0A0J9YTW6 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scn2aA0A0J9YTW6 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Scn2aA0A0J9YTW6 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Scn2aA0A0J9YTW6 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Scn2aA0A0J9YTW6 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Scn2aA0A0J9YTW6 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Scn2aA0A0J9YTW6 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Scn2aA0A0J9YTW6 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Scn2aA0A0J9YTW6 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Scn2aA0A0J9YTW6 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Scn2aA0A0J9YTW6 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Scn2aA0A0J9YTW6 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18■□□□□ 0.47
Scn2aA0A0J9YTW6 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18■□□□□ 0.47
Scn2aA0A0J9YTW6 Golph3-202ENSMUST00000226517 2359 ntBASIC18■□□□□ 0.47
Scn2aA0A0J9YTW6 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Scn2aA0A0J9YTW6 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
Scn2aA0A0J9YTW6 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Scn2aA0A0J9YTW6 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.99■□□□□ 0.47
Scn2aA0A0J9YTW6 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.99■□□□□ 0.47
Scn2aA0A0J9YTW6 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Scn2aA0A0J9YTW6 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.99■□□□□ 0.47
Scn2aA0A0J9YTW6 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Scn2aA0A0J9YTW6 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Scn2aA0A0J9YTW6 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn2aA0A0J9YTW6 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn2aA0A0J9YTW6 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn2aA0A0J9YTW6 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn2aA0A0J9YTW6 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn2aA0A0J9YTW6 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn2aA0A0J9YTW6 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Scn2aA0A0J9YTW6 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Scn2aA0A0J9YTW6 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scn2aA0A0J9YTW6 Gm43060-201ENSMUST00000200621 289 ntBASIC17.98■□□□□ 0.47
Scn2aA0A0J9YTW6 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.98■□□□□ 0.47
Scn2aA0A0J9YTW6 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scn2aA0A0J9YTW6 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Scn2aA0A0J9YTW6 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scn2aA0A0J9YTW6 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scn2aA0A0J9YTW6 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scn2aA0A0J9YTW6 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scn2aA0A0J9YTW6 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.98■□□□□ 0.47
Scn2aA0A0J9YTW6 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scn2aA0A0J9YTW6 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scn2aA0A0J9YTW6 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn2aA0A0J9YTW6 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn2aA0A0J9YTW6 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn2aA0A0J9YTW6 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn2aA0A0J9YTW6 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn2aA0A0J9YTW6 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn2aA0A0J9YTW6 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn2aA0A0J9YTW6 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Scn2aA0A0J9YTW6 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn2aA0A0J9YTW6 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Scn2aA0A0J9YTW6 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.96■□□□□ 0.47
Scn2aA0A0J9YTW6 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Scn2aA0A0J9YTW6 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.96■□□□□ 0.47
Scn2aA0A0J9YTW6 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.96■□□□□ 0.47
Scn2aA0A0J9YTW6 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Scn2aA0A0J9YTW6 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
Scn2aA0A0J9YTW6 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Scn2aA0A0J9YTW6 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn2aA0A0J9YTW6 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Scn2aA0A0J9YTW6 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn2aA0A0J9YTW6 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.95■□□□□ 0.46
Scn2aA0A0J9YTW6 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn2aA0A0J9YTW6 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Scn2aA0A0J9YTW6 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn2aA0A0J9YTW6 Notumos-201ENSMUST00000151998 2659 ntBASIC17.95■□□□□ 0.46
Scn2aA0A0J9YTW6 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Scn2aA0A0J9YTW6 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn2aA0A0J9YTW6 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn2aA0A0J9YTW6 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn2aA0A0J9YTW6 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn2aA0A0J9YTW6 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
Scn2aA0A0J9YTW6 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Scn2aA0A0J9YTW6 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn2aA0A0J9YTW6 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn2aA0A0J9YTW6 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Scn2aA0A0J9YTW6 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Scn2aA0A0J9YTW6 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.94■□□□□ 0.46
Scn2aA0A0J9YTW6 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn2aA0A0J9YTW6 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Scn2aA0A0J9YTW6 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Scn2aA0A0J9YTW6 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn2aA0A0J9YTW6 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Scn2aA0A0J9YTW6 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Scn2aA0A0J9YTW6 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Scn2aA0A0J9YTW6 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn2aA0A0J9YTW6 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn2aA0A0J9YTW6 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn2aA0A0J9YTW6 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn2aA0A0J9YTW6 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Scn2aA0A0J9YTW6 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.93■□□□□ 0.46
Scn2aA0A0J9YTW6 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms