Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv19A0A0B4J1H4 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv19A0A0B4J1H4 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv19A0A0B4J1H4 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv19A0A0B4J1H4 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trbv19A0A0B4J1H4 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Trbv19A0A0B4J1H4 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv19A0A0B4J1H4 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv19A0A0B4J1H4 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv19A0A0B4J1H4 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv19A0A0B4J1H4 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv19A0A0B4J1H4 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv19A0A0B4J1H4 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Trbv19A0A0B4J1H4 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv19A0A0B4J1H4 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC15.66■□□□□ 0.1
Trbv19A0A0B4J1H4 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv19A0A0B4J1H4 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv19A0A0B4J1H4 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv19A0A0B4J1H4 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv19A0A0B4J1H4 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv19A0A0B4J1H4 Gm6085-201ENSMUST00000182774 1470 ntBASIC15.65■□□□□ 0.1
Trbv19A0A0B4J1H4 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv19A0A0B4J1H4 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC15.65■□□□□ 0.1
Trbv19A0A0B4J1H4 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv19A0A0B4J1H4 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv19A0A0B4J1H4 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC15.65■□□□□ 0.1
Trbv19A0A0B4J1H4 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv19A0A0B4J1H4 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.1
Trbv19A0A0B4J1H4 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv19A0A0B4J1H4 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv19A0A0B4J1H4 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv19A0A0B4J1H4 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv19A0A0B4J1H4 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv19A0A0B4J1H4 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv19A0A0B4J1H4 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv19A0A0B4J1H4 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv19A0A0B4J1H4 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv19A0A0B4J1H4 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv19A0A0B4J1H4 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv19A0A0B4J1H4 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv19A0A0B4J1H4 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv19A0A0B4J1H4 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv19A0A0B4J1H4 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv19A0A0B4J1H4 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv19A0A0B4J1H4 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Trbv19A0A0B4J1H4 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv19A0A0B4J1H4 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Trbv19A0A0B4J1H4 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv19A0A0B4J1H4 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv19A0A0B4J1H4 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv19A0A0B4J1H4 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv19A0A0B4J1H4 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv19A0A0B4J1H4 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv19A0A0B4J1H4 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv19A0A0B4J1H4 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv19A0A0B4J1H4 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv19A0A0B4J1H4 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC15.62■□□□□ 0.09
Trbv19A0A0B4J1H4 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv19A0A0B4J1H4 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv19A0A0B4J1H4 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv19A0A0B4J1H4 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv19A0A0B4J1H4 AA386476-201ENSMUST00000098781 1665 ntBASIC15.62■□□□□ 0.09
Trbv19A0A0B4J1H4 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv19A0A0B4J1H4 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv19A0A0B4J1H4 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv19A0A0B4J1H4 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC15.61■□□□□ 0.09
Trbv19A0A0B4J1H4 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv19A0A0B4J1H4 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Trbv19A0A0B4J1H4 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv19A0A0B4J1H4 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Trbv19A0A0B4J1H4 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC15.61■□□□□ 0.09
Trbv19A0A0B4J1H4 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Trbv19A0A0B4J1H4 Gm20100-201ENSMUST00000209418 2272 ntBASIC15.61■□□□□ 0.09
Trbv19A0A0B4J1H4 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
Trbv19A0A0B4J1H4 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv19A0A0B4J1H4 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv19A0A0B4J1H4 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC15.6■□□□□ 0.09
Trbv19A0A0B4J1H4 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv19A0A0B4J1H4 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv19A0A0B4J1H4 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv19A0A0B4J1H4 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC15.6■□□□□ 0.09
Trbv19A0A0B4J1H4 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC15.6■□□□□ 0.09
Trbv19A0A0B4J1H4 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv19A0A0B4J1H4 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv19A0A0B4J1H4 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv19A0A0B4J1H4 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv19A0A0B4J1H4 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv19A0A0B4J1H4 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv19A0A0B4J1H4 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv19A0A0B4J1H4 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trbv19A0A0B4J1H4 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC15.6■□□□□ 0.09
Trbv19A0A0B4J1H4 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC15.59■□□□□ 0.09
Trbv19A0A0B4J1H4 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC15.59■□□□□ 0.09
Trbv19A0A0B4J1H4 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Trbv19A0A0B4J1H4 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv19A0A0B4J1H4 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv19A0A0B4J1H4 Golgb1-201ENSMUST00000023534 498 ntBASIC15.59■□□□□ 0.09
Trbv19A0A0B4J1H4 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.59■□□□□ 0.09
Trbv19A0A0B4J1H4 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv19A0A0B4J1H4 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms