Protein–RNA interactions for Protein: A0A0B4J1G8

Trbv2, T cell receptor beta, variable 2 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv2A0A0B4J1G8 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.36■□□□□ 0.37
Trbv2A0A0B4J1G8 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Trbv2A0A0B4J1G8 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv2A0A0B4J1G8 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv2A0A0B4J1G8 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.35■□□□□ 0.37
Trbv2A0A0B4J1G8 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.35■□□□□ 0.37
Trbv2A0A0B4J1G8 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv2A0A0B4J1G8 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv2A0A0B4J1G8 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.35■□□□□ 0.37
Trbv2A0A0B4J1G8 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv2A0A0B4J1G8 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv2A0A0B4J1G8 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv2A0A0B4J1G8 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv2A0A0B4J1G8 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv2A0A0B4J1G8 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv2A0A0B4J1G8 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv2A0A0B4J1G8 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv2A0A0B4J1G8 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trbv2A0A0B4J1G8 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trbv2A0A0B4J1G8 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Trbv2A0A0B4J1G8 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trbv2A0A0B4J1G8 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Trbv2A0A0B4J1G8 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Trbv2A0A0B4J1G8 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.34■□□□□ 0.37
Trbv2A0A0B4J1G8 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trbv2A0A0B4J1G8 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trbv2A0A0B4J1G8 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trbv2A0A0B4J1G8 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trbv2A0A0B4J1G8 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Trbv2A0A0B4J1G8 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trbv2A0A0B4J1G8 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trbv2A0A0B4J1G8 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trbv2A0A0B4J1G8 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trbv2A0A0B4J1G8 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.33■□□□□ 0.36
Trbv2A0A0B4J1G8 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Trbv2A0A0B4J1G8 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.33■□□□□ 0.36
Trbv2A0A0B4J1G8 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trbv2A0A0B4J1G8 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trbv2A0A0B4J1G8 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trbv2A0A0B4J1G8 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Trbv2A0A0B4J1G8 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trbv2A0A0B4J1G8 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv2A0A0B4J1G8 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv2A0A0B4J1G8 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.32■□□□□ 0.36
Trbv2A0A0B4J1G8 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Trbv2A0A0B4J1G8 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Trbv2A0A0B4J1G8 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.32■□□□□ 0.36
Trbv2A0A0B4J1G8 Gm9870-201ENSMUST00000063874 645 ntBASIC17.32■□□□□ 0.36
Trbv2A0A0B4J1G8 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv2A0A0B4J1G8 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv2A0A0B4J1G8 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv2A0A0B4J1G8 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv2A0A0B4J1G8 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.31■□□□□ 0.36
Trbv2A0A0B4J1G8 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv2A0A0B4J1G8 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv2A0A0B4J1G8 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv2A0A0B4J1G8 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv2A0A0B4J1G8 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv2A0A0B4J1G8 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.31■□□□□ 0.36
Trbv2A0A0B4J1G8 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv2A0A0B4J1G8 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Trbv2A0A0B4J1G8 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
Trbv2A0A0B4J1G8 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv2A0A0B4J1G8 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv2A0A0B4J1G8 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.31■□□□□ 0.36
Trbv2A0A0B4J1G8 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv2A0A0B4J1G8 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv2A0A0B4J1G8 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trbv2A0A0B4J1G8 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trbv2A0A0B4J1G8 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Trbv2A0A0B4J1G8 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trbv2A0A0B4J1G8 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trbv2A0A0B4J1G8 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trbv2A0A0B4J1G8 AA386476-201ENSMUST00000098781 1665 ntBASIC17.3■□□□□ 0.36
Trbv2A0A0B4J1G8 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trbv2A0A0B4J1G8 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trbv2A0A0B4J1G8 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trbv2A0A0B4J1G8 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trbv2A0A0B4J1G8 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trbv2A0A0B4J1G8 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trbv2A0A0B4J1G8 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trbv2A0A0B4J1G8 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trbv2A0A0B4J1G8 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Trbv2A0A0B4J1G8 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trbv2A0A0B4J1G8 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Trbv2A0A0B4J1G8 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv2A0A0B4J1G8 Cap2-205ENSMUST00000225824 1634 ntBASIC17.29■□□□□ 0.36
Trbv2A0A0B4J1G8 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Trbv2A0A0B4J1G8 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv2A0A0B4J1G8 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.29■□□□□ 0.36
Trbv2A0A0B4J1G8 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv2A0A0B4J1G8 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.29■□□□□ 0.36
Trbv2A0A0B4J1G8 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv2A0A0B4J1G8 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.29■□□□□ 0.36
Trbv2A0A0B4J1G8 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv2A0A0B4J1G8 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Trbv2A0A0B4J1G8 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv2A0A0B4J1G8 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv2A0A0B4J1G8 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv2A0A0B4J1G8 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms