Protein–RNA interactions for Protein: A0A0A6YX06

Trbv21, T cell receptor beta, variable 21 (Fragment), mousemouse

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv21A0A0A6YX06 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv21A0A0A6YX06 Gm43137-201ENSMUST00000198052 594 ntBASIC18.12■□□□□ 0.49
Trbv21A0A0A6YX06 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.12■□□□□ 0.49
Trbv21A0A0A6YX06 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.12■□□□□ 0.49
Trbv21A0A0A6YX06 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv21A0A0A6YX06 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.12■□□□□ 0.49
Trbv21A0A0A6YX06 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv21A0A0A6YX06 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv21A0A0A6YX06 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv21A0A0A6YX06 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv21A0A0A6YX06 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv21A0A0A6YX06 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv21A0A0A6YX06 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Trbv21A0A0A6YX06 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv21A0A0A6YX06 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.11■□□□□ 0.49
Trbv21A0A0A6YX06 Spcs1-204ENSMUST00000226782 949 ntBASIC18.11■□□□□ 0.49
Trbv21A0A0A6YX06 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv21A0A0A6YX06 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Trbv21A0A0A6YX06 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv21A0A0A6YX06 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.11■□□□□ 0.49
Trbv21A0A0A6YX06 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv21A0A0A6YX06 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv21A0A0A6YX06 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv21A0A0A6YX06 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv21A0A0A6YX06 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.1■□□□□ 0.49
Trbv21A0A0A6YX06 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trbv21A0A0A6YX06 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trbv21A0A0A6YX06 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trbv21A0A0A6YX06 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
Trbv21A0A0A6YX06 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Trbv21A0A0A6YX06 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trbv21A0A0A6YX06 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trbv21A0A0A6YX06 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Trbv21A0A0A6YX06 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Trbv21A0A0A6YX06 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trbv21A0A0A6YX06 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv21A0A0A6YX06 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv21A0A0A6YX06 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv21A0A0A6YX06 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.09■□□□□ 0.49
Trbv21A0A0A6YX06 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.09■□□□□ 0.49
Trbv21A0A0A6YX06 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv21A0A0A6YX06 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv21A0A0A6YX06 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv21A0A0A6YX06 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trbv21A0A0A6YX06 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trbv21A0A0A6YX06 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Trbv21A0A0A6YX06 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trbv21A0A0A6YX06 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.08■□□□□ 0.48
Trbv21A0A0A6YX06 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Trbv21A0A0A6YX06 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trbv21A0A0A6YX06 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trbv21A0A0A6YX06 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trbv21A0A0A6YX06 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trbv21A0A0A6YX06 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv21A0A0A6YX06 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv21A0A0A6YX06 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv21A0A0A6YX06 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Trbv21A0A0A6YX06 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv21A0A0A6YX06 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv21A0A0A6YX06 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv21A0A0A6YX06 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.07■□□□□ 0.48
Trbv21A0A0A6YX06 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv21A0A0A6YX06 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.07■□□□□ 0.48
Trbv21A0A0A6YX06 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Trbv21A0A0A6YX06 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.07■□□□□ 0.48
Trbv21A0A0A6YX06 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv21A0A0A6YX06 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv21A0A0A6YX06 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Trbv21A0A0A6YX06 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trbv21A0A0A6YX06 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trbv21A0A0A6YX06 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trbv21A0A0A6YX06 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.06■□□□□ 0.48
Trbv21A0A0A6YX06 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.06■□□□□ 0.48
Trbv21A0A0A6YX06 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trbv21A0A0A6YX06 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trbv21A0A0A6YX06 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trbv21A0A0A6YX06 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trbv21A0A0A6YX06 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trbv21A0A0A6YX06 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Trbv21A0A0A6YX06 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trbv21A0A0A6YX06 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trbv21A0A0A6YX06 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trbv21A0A0A6YX06 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Trbv21A0A0A6YX06 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Trbv21A0A0A6YX06 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trbv21A0A0A6YX06 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.05■□□□□ 0.48
Trbv21A0A0A6YX06 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trbv21A0A0A6YX06 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trbv21A0A0A6YX06 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trbv21A0A0A6YX06 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.05■□□□□ 0.48
Trbv21A0A0A6YX06 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Trbv21A0A0A6YX06 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trbv21A0A0A6YX06 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trbv21A0A0A6YX06 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trbv21A0A0A6YX06 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trbv21A0A0A6YX06 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC18.04■□□□□ 0.48
Trbv21A0A0A6YX06 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trbv21A0A0A6YX06 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Trbv21A0A0A6YX06 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Trbv21A0A0A6YX06 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms