Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.13■□□□□ 0.01
Trav6-5A0A075B6B5 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6-5A0A075B6B5 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6-5A0A075B6B5 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-5A0A075B6B5 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-5A0A075B6B5 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC15.12■□□□□ 0.01
Trav6-5A0A075B6B5 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-5A0A075B6B5 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-5A0A075B6B5 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.12■□□□□ 0.01
Trav6-5A0A075B6B5 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-5A0A075B6B5 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Trav6-5A0A075B6B5 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-5A0A075B6B5 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-5A0A075B6B5 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trav6-5A0A075B6B5 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-5A0A075B6B5 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-5A0A075B6B5 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trav6-5A0A075B6B5 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-5A0A075B6B5 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trav6-5A0A075B6B5 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-5A0A075B6B5 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Trav6-5A0A075B6B5 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-5A0A075B6B5 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trav6-5A0A075B6B5 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-5A0A075B6B5 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-5A0A075B6B5 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trav6-5A0A075B6B5 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-5A0A075B6B5 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC15.11■□□□□ 0.01
Trav6-5A0A075B6B5 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Trav6-5A0A075B6B5 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-5A0A075B6B5 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trav6-5A0A075B6B5 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-5A0A075B6B5 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-5A0A075B6B5 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-5A0A075B6B5 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-5A0A075B6B5 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Trav6-5A0A075B6B5 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-5A0A075B6B5 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-5A0A075B6B5 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.1■□□□□ 0.01
Trav6-5A0A075B6B5 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-5A0A075B6B5 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-5A0A075B6B5 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-5A0A075B6B5 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-5A0A075B6B5 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trav6-5A0A075B6B5 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-5A0A075B6B5 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-5A0A075B6B5 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-5A0A075B6B5 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-5A0A075B6B5 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-5A0A075B6B5 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-5A0A075B6B5 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-5A0A075B6B5 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-5A0A075B6B5 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-5A0A075B6B5 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-5A0A075B6B5 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-5A0A075B6B5 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-5A0A075B6B5 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trav6-5A0A075B6B5 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Trav6-5A0A075B6B5 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC15.09■□□□□ 0.01
Trav6-5A0A075B6B5 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trav6-5A0A075B6B5 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-5A0A075B6B5 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trav6-5A0A075B6B5 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-5A0A075B6B5 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-5A0A075B6B5 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trav6-5A0A075B6B5 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trav6-5A0A075B6B5 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC15.08■□□□□ 0
Trav6-5A0A075B6B5 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav6-5A0A075B6B5 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.08■□□□□ 0
Trav6-5A0A075B6B5 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav6-5A0A075B6B5 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
Trav6-5A0A075B6B5 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav6-5A0A075B6B5 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav6-5A0A075B6B5 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav6-5A0A075B6B5 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6-5A0A075B6B5 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6-5A0A075B6B5 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav6-5A0A075B6B5 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Trav6-5A0A075B6B5 Mir6236-201ENSMUST00000184437 123 ntBASIC15.07■□□□□ 0
Trav6-5A0A075B6B5 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.07■□□□□ 0
Trav6-5A0A075B6B5 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6-5A0A075B6B5 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6-5A0A075B6B5 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6-5A0A075B6B5 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6-5A0A075B6B5 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6-5A0A075B6B5 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6-5A0A075B6B5 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC15.06■□□□□ 0
Trav6-5A0A075B6B5 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6-5A0A075B6B5 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC15.06■□□□□ 0
Trav6-5A0A075B6B5 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trav6-5A0A075B6B5 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6-5A0A075B6B5 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6-5A0A075B6B5 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Trav6-5A0A075B6B5 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav6-5A0A075B6B5 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Trav6-5A0A075B6B5 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav6-5A0A075B6B5 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav6-5A0A075B6B5 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav6-5A0A075B6B5 Grk6-206ENSMUST00000224995 2971 ntBASIC15.05■□□□□ 0
Trav6-5A0A075B6B5 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms