Protein–RNA interactions for Protein: A0A075B6A6

Trav6n-7, T cell receptor alpha variable 6N-7 (Fragment), mousemouse

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-7A0A075B6A6 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6n-7A0A075B6A6 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6n-7A0A075B6A6 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Trav6n-7A0A075B6A6 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6n-7A0A075B6A6 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6n-7A0A075B6A6 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6n-7A0A075B6A6 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6n-7A0A075B6A6 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6n-7A0A075B6A6 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6n-7A0A075B6A6 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6n-7A0A075B6A6 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Trav6n-7A0A075B6A6 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6n-7A0A075B6A6 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6n-7A0A075B6A6 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6n-7A0A075B6A6 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6n-7A0A075B6A6 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC16.61■□□□□ 0.25
Trav6n-7A0A075B6A6 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6n-7A0A075B6A6 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6n-7A0A075B6A6 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6n-7A0A075B6A6 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Trav6n-7A0A075B6A6 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6n-7A0A075B6A6 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Trav6n-7A0A075B6A6 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav6n-7A0A075B6A6 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC16.6■□□□□ 0.25
Trav6n-7A0A075B6A6 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Trav6n-7A0A075B6A6 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trav6n-7A0A075B6A6 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav6n-7A0A075B6A6 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav6n-7A0A075B6A6 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav6n-7A0A075B6A6 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav6n-7A0A075B6A6 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav6n-7A0A075B6A6 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav6n-7A0A075B6A6 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav6n-7A0A075B6A6 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.59■□□□□ 0.25
Trav6n-7A0A075B6A6 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Trav6n-7A0A075B6A6 AA386476-201ENSMUST00000098781 1665 ntBASIC16.59■□□□□ 0.25
Trav6n-7A0A075B6A6 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav6n-7A0A075B6A6 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav6n-7A0A075B6A6 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav6n-7A0A075B6A6 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.58■□□□□ 0.25
Trav6n-7A0A075B6A6 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav6n-7A0A075B6A6 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Trav6n-7A0A075B6A6 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC16.58■□□□□ 0.24
Trav6n-7A0A075B6A6 Gm43017-201ENSMUST00000198296 752 ntBASIC16.58■□□□□ 0.24
Trav6n-7A0A075B6A6 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav6n-7A0A075B6A6 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav6n-7A0A075B6A6 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav6n-7A0A075B6A6 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav6n-7A0A075B6A6 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav6n-7A0A075B6A6 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav6n-7A0A075B6A6 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
Trav6n-7A0A075B6A6 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav6n-7A0A075B6A6 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.57■□□□□ 0.24
Trav6n-7A0A075B6A6 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav6n-7A0A075B6A6 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC16.57■□□□□ 0.24
Trav6n-7A0A075B6A6 AC165080.2-201ENSMUST00000217491 1530 ntBASIC16.57■□□□□ 0.24
Trav6n-7A0A075B6A6 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.57■□□□□ 0.24
Trav6n-7A0A075B6A6 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav6n-7A0A075B6A6 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav6n-7A0A075B6A6 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
Trav6n-7A0A075B6A6 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trav6n-7A0A075B6A6 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
Trav6n-7A0A075B6A6 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC16.57■□□□□ 0.24
Trav6n-7A0A075B6A6 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.57■□□□□ 0.24
Trav6n-7A0A075B6A6 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav6n-7A0A075B6A6 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav6n-7A0A075B6A6 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav6n-7A0A075B6A6 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav6n-7A0A075B6A6 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav6n-7A0A075B6A6 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav6n-7A0A075B6A6 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trav6n-7A0A075B6A6 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Trav6n-7A0A075B6A6 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav6n-7A0A075B6A6 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav6n-7A0A075B6A6 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC16.56■□□□□ 0.24
Trav6n-7A0A075B6A6 Smad6-203ENSMUST00000179458 273 ntBASIC16.56■□□□□ 0.24
Trav6n-7A0A075B6A6 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC16.56■□□□□ 0.24
Trav6n-7A0A075B6A6 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav6n-7A0A075B6A6 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trav6n-7A0A075B6A6 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trav6n-7A0A075B6A6 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6n-7A0A075B6A6 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6n-7A0A075B6A6 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6n-7A0A075B6A6 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC16.55■□□□□ 0.24
Trav6n-7A0A075B6A6 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trav6n-7A0A075B6A6 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6n-7A0A075B6A6 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6n-7A0A075B6A6 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6n-7A0A075B6A6 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6n-7A0A075B6A6 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6n-7A0A075B6A6 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trav6n-7A0A075B6A6 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.54■□□□□ 0.24
Trav6n-7A0A075B6A6 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav6n-7A0A075B6A6 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC16.54■□□□□ 0.24
Trav6n-7A0A075B6A6 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav6n-7A0A075B6A6 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav6n-7A0A075B6A6 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav6n-7A0A075B6A6 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Trav6n-7A0A075B6A6 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav6n-7A0A075B6A6 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms