Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav4-2A0A075B638 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav4-2A0A075B638 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav4-2A0A075B638 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Trav4-2A0A075B638 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav4-2A0A075B638 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav4-2A0A075B638 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav4-2A0A075B638 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav4-2A0A075B638 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav4-2A0A075B638 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.46■□□□□ 0.07
Trav4-2A0A075B638 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav4-2A0A075B638 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav4-2A0A075B638 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Trav4-2A0A075B638 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Trav4-2A0A075B638 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC15.46■□□□□ 0.07
Trav4-2A0A075B638 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav4-2A0A075B638 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Trav4-2A0A075B638 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav4-2A0A075B638 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Trav4-2A0A075B638 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav4-2A0A075B638 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav4-2A0A075B638 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trav4-2A0A075B638 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav4-2A0A075B638 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trav4-2A0A075B638 Gm5540-201ENSMUST00000131852 1848 ntBASIC15.45■□□□□ 0.06
Trav4-2A0A075B638 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav4-2A0A075B638 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav4-2A0A075B638 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav4-2A0A075B638 Gm10420-201ENSMUST00000121713 882 ntBASIC15.45■□□□□ 0.06
Trav4-2A0A075B638 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trav4-2A0A075B638 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav4-2A0A075B638 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav4-2A0A075B638 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav4-2A0A075B638 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav4-2A0A075B638 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav4-2A0A075B638 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
Trav4-2A0A075B638 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav4-2A0A075B638 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav4-2A0A075B638 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav4-2A0A075B638 Gm16464-201ENSMUST00000117815 1095 ntBASIC15.44■□□□□ 0.06
Trav4-2A0A075B638 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC15.44■□□□□ 0.06
Trav4-2A0A075B638 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.44■□□□□ 0.06
Trav4-2A0A075B638 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav4-2A0A075B638 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav4-2A0A075B638 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC15.44■□□□□ 0.06
Trav4-2A0A075B638 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trav4-2A0A075B638 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav4-2A0A075B638 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC15.44■□□□□ 0.06
Trav4-2A0A075B638 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav4-2A0A075B638 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav4-2A0A075B638 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trav4-2A0A075B638 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav4-2A0A075B638 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav4-2A0A075B638 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav4-2A0A075B638 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav4-2A0A075B638 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav4-2A0A075B638 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav4-2A0A075B638 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav4-2A0A075B638 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC15.43■□□□□ 0.06
Trav4-2A0A075B638 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav4-2A0A075B638 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trav4-2A0A075B638 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
Trav4-2A0A075B638 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav4-2A0A075B638 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Trav4-2A0A075B638 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.42■□□□□ 0.06
Trav4-2A0A075B638 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav4-2A0A075B638 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC15.42■□□□□ 0.06
Trav4-2A0A075B638 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav4-2A0A075B638 Gm43182-201ENSMUST00000199476 2528 ntBASIC15.42■□□□□ 0.06
Trav4-2A0A075B638 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
Trav4-2A0A075B638 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav4-2A0A075B638 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC15.42■□□□□ 0.06
Trav4-2A0A075B638 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav4-2A0A075B638 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav4-2A0A075B638 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav4-2A0A075B638 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav4-2A0A075B638 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Trav4-2A0A075B638 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav4-2A0A075B638 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav4-2A0A075B638 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav4-2A0A075B638 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav4-2A0A075B638 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav4-2A0A075B638 Gm10399-202ENSMUST00000202768 748 ntBASIC15.41■□□□□ 0.06
Trav4-2A0A075B638 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav4-2A0A075B638 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.41■□□□□ 0.06
Trav4-2A0A075B638 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.41■□□□□ 0.06
Trav4-2A0A075B638 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.41■□□□□ 0.06
Trav4-2A0A075B638 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav4-2A0A075B638 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav4-2A0A075B638 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav4-2A0A075B638 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trav4-2A0A075B638 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav4-2A0A075B638 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav4-2A0A075B638 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav4-2A0A075B638 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav4-2A0A075B638 Gm45640-201ENSMUST00000210665 1896 ntBASIC15.4■□□□□ 0.06
Trav4-2A0A075B638 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav4-2A0A075B638 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav4-2A0A075B638 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav4-2A0A075B638 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 157.6 ms