Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm29108-201ENSMUST00000186020 1498 ntTSL 5 BASIC8.05□□□□□ -1.12
Hmgb3O54879 Gm29248-201ENSMUST00000186074 1498 ntTSL 5 BASIC8.05□□□□□ -1.12
Hmgb3O54879 Gm28207-202ENSMUST00000187419 1498 ntTSL 5 BASIC8.05□□□□□ -1.12
Hmgb3O54879 Gm28365-202ENSMUST00000189584 1498 ntTSL 5 BASIC8.05□□□□□ -1.12
Hmgb3O54879 Gm29117-202ENSMUST00000190374 1498 ntTSL 5 BASIC8.05□□□□□ -1.12
Hmgb3O54879 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Hmgb3O54879 Ptprb-203ENSMUST00000218553 7016 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Hmgb3O54879 Uspl1-204ENSMUST00000119685 3604 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Hmgb3O54879 Fam168a-205ENSMUST00000207875 4077 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Hmgb3O54879 Gm37593-201ENSMUST00000191669 3254 ntBASIC8.05□□□□□ -1.12
Hmgb3O54879 Trrap-215ENSMUST00000213013 12398 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Hmgb3O54879 Heatr4-201ENSMUST00000164935 3038 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Hmgb3O54879 Gigyf2-205ENSMUST00000172794 4029 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Hmgb3O54879 Etl4-203ENSMUST00000114604 4786 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Hmgb3O54879 Nufip1-201ENSMUST00000022586 3974 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Hmgb3O54879 Gm40655-201ENSMUST00000220802 1880 ntTSL 5 BASIC8.04□□□□□ -1.12
Hmgb3O54879 Cd22-202ENSMUST00000108125 3633 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Hmgb3O54879 Gm37582-201ENSMUST00000192953 1409 ntBASIC8.04□□□□□ -1.12
Hmgb3O54879 Gm42826-201ENSMUST00000197548 2639 ntBASIC8.04□□□□□ -1.12
Hmgb3O54879 Wasf1-201ENSMUST00000019975 2609 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Hmgb3O54879 Rnmt-201ENSMUST00000009679 5008 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Hmgb3O54879 5730455P16Rik-201ENSMUST00000103225 4554 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Hmgb3O54879 Gm37178-201ENSMUST00000194962 1539 ntBASIC8.04□□□□□ -1.12
Hmgb3O54879 Gm37534-201ENSMUST00000194483 5222 ntBASIC8.04□□□□□ -1.12
Hmgb3O54879 Olfr522-201ENSMUST00000050585 4766 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Hmgb3O54879 Gm31763-202ENSMUST00000218205 1724 ntBASIC8.04□□□□□ -1.12
Hmgb3O54879 Sag-201ENSMUST00000077772 1719 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Hmgb3O54879 4930552P12Rik-201ENSMUST00000181198 2496 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Hmgb3O54879 Tmem63a-201ENSMUST00000027800 3306 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Hmgb3O54879 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Hmgb3O54879 Sdc2-201ENSMUST00000022871 3527 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Hmgb3O54879 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Hmgb3O54879 Zbp1-202ENSMUST00000109116 770 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Hmgb3O54879 Gm13117-201ENSMUST00000120894 691 ntBASIC8.04□□□□□ -1.12
Hmgb3O54879 Gm14616-201ENSMUST00000131690 314 ntTSL 3 BASIC8.04□□□□□ -1.12
Hmgb3O54879 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Hmgb3O54879 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC8.04□□□□□ -1.12
Hmgb3O54879 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Hmgb3O54879 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Hmgb3O54879 Gm16030-201ENSMUST00000159098 603 ntBASIC8.04□□□□□ -1.12
Hmgb3O54879 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC8.04□□□□□ -1.12
Hmgb3O54879 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Hmgb3O54879 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
Hmgb3O54879 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC8.04□□□□□ -1.12
Hmgb3O54879 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Hmgb3O54879 Gm29200-201ENSMUST00000188118 1085 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Hmgb3O54879 Gm29157-201ENSMUST00000188753 612 ntBASIC8.04□□□□□ -1.12
Hmgb3O54879 Ighv5-8-202ENSMUST00000191967 337 ntBASIC8.04□□□□□ -1.12
Hmgb3O54879 Gm37638-201ENSMUST00000194337 1123 ntBASIC8.04□□□□□ -1.12
Hmgb3O54879 Gm6342-201ENSMUST00000204344 766 ntBASIC8.04□□□□□ -1.12
Hmgb3O54879 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC8.04□□□□□ -1.12
Hmgb3O54879 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC8.04□□□□□ -1.12
Hmgb3O54879 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Hmgb3O54879 AC154806.7-201ENSMUST00000227998 202 ntBASIC8.04□□□□□ -1.12
Hmgb3O54879 Gm7536-201ENSMUST00000077389 444 ntBASIC8.04□□□□□ -1.12
Hmgb3O54879 Evi5-201ENSMUST00000112642 5849 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Hmgb3O54879 Trpc4-205ENSMUST00000200048 3170 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Hmgb3O54879 Olfr531-201ENSMUST00000080153 2320 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Hmgb3O54879 Rab23-202ENSMUST00000115174 4218 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Hmgb3O54879 Synm-203ENSMUST00000207102 3388 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Hmgb3O54879 Gm20744-201ENSMUST00000208972 2626 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Hmgb3O54879 Dock1-201ENSMUST00000084488 6807 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Hmgb3O54879 Trub1-202ENSMUST00000026073 3795 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Hmgb3O54879 Gm42575-201ENSMUST00000202942 1674 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Hmgb3O54879 Gm26710-201ENSMUST00000181265 1793 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Hmgb3O54879 Gm14461-201ENSMUST00000067618 1780 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Hmgb3O54879 Ppp2r3a-202ENSMUST00000075941 6786 ntTSL 5 BASIC8.04□□□□□ -1.12
Hmgb3O54879 Nrk-202ENSMUST00000113052 8043 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Hmgb3O54879 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC8.04□□□□□ -1.12
Hmgb3O54879 Syt11-201ENSMUST00000090945 4567 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Hmgb3O54879 Ces1b-201ENSMUST00000109582 1964 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Hmgb3O54879 Slc9a8-203ENSMUST00000109218 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Hmgb3O54879 Tsr2-201ENSMUST00000026295 3804 ntTSL 2 BASIC8.04□□□□□ -1.12
Hmgb3O54879 Apol7a-204ENSMUST00000176074 2388 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Hmgb3O54879 Hook3-201ENSMUST00000037182 12836 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Hmgb3O54879 Kif1b-201ENSMUST00000030806 6991 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Hmgb3O54879 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Hmgb3O54879 Sulf1-205ENSMUST00000186051 4563 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Hmgb3O54879 Olfr1424-202ENSMUST00000207681 1714 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Hmgb3O54879 Entpd8-202ENSMUST00000114376 1942 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Hmgb3O54879 G6pc-201ENSMUST00000019469 2414 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Hmgb3O54879 Mapkap1-203ENSMUST00000113126 3018 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Hmgb3O54879 Sfi1-210ENSMUST00000140846 3604 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Hmgb3O54879 Gm46404-201ENSMUST00000221461 4114 ntBASIC8.03□□□□□ -1.12
Hmgb3O54879 Atp8a1-207ENSMUST00000135930 8069 ntAPPRIS ALT1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Hmgb3O54879 Lancl1-201ENSMUST00000027149 4270 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Hmgb3O54879 Slc6a3-201ENSMUST00000022100 3456 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Hmgb3O54879 Gm16630-201ENSMUST00000180741 3257 ntTSL 5 BASIC8.03□□□□□ -1.12
Hmgb3O54879 Sbk3-202ENSMUST00000144863 3152 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Hmgb3O54879 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Hmgb3O54879 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Hmgb3O54879 4930589L23Rik-201ENSMUST00000091023 1364 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Hmgb3O54879 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC8.03□□□□□ -1.12
Hmgb3O54879 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Hmgb3O54879 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC8.03□□□□□ -1.12
Hmgb3O54879 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC8.03□□□□□ -1.12
Hmgb3O54879 Gm6335-201ENSMUST00000118081 1194 ntBASIC8.03□□□□□ -1.12
Hmgb3O54879 Gm4909-201ENSMUST00000118749 794 ntBASIC8.03□□□□□ -1.12
Hmgb3O54879 Gm7816-201ENSMUST00000119884 1194 ntBASIC8.03□□□□□ -1.12
Hmgb3O54879 Gm15542-201ENSMUST00000121585 1194 ntBASIC8.03□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms