Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Slc27a6-201ENSMUST00000025500 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Tcl1-201ENSMUST00000041316 1398 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Proser3-201ENSMUST00000062708 1905 ntAPPRIS P2 TSL 5 BASIC9.37□□□□□ -0.91
Clrn1Q8K445 Napb-201ENSMUST00000028926 4412 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Clrn1Q8K445 Mtfr1-204ENSMUST00000130645 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Clrn1Q8K445 Trem1-201ENSMUST00000048782 2993 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Clrn1Q8K445 Gramd1b-202ENSMUST00000118159 2781 ntTSL 5 BASIC9.36□□□□□ -0.91
Clrn1Q8K445 Inpp5d-201ENSMUST00000042275 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Clrn1Q8K445 Klhl1-201ENSMUST00000022666 6645 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Clrn1Q8K445 Tmco3-201ENSMUST00000045229 4335 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Clrn1Q8K445 Cd59a-201ENSMUST00000040423 1691 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Clrn1Q8K445 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Clrn1Q8K445 Tfdp1-204ENSMUST00000209885 2511 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Clrn1Q8K445 Nsdhl-201ENSMUST00000033715 2168 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Clrn1Q8K445 9530056K15Rik-201ENSMUST00000061947 2315 ntBASIC9.36□□□□□ -0.91
Clrn1Q8K445 Pde10a-211ENSMUST00000149440 4897 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Clrn1Q8K445 Arhgap25-203ENSMUST00000113637 3671 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Clrn1Q8K445 Fam169a-201ENSMUST00000042517 4547 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Clrn1Q8K445 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Clrn1Q8K445 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Clrn1Q8K445 Gm12700-201ENSMUST00000118145 457 ntBASIC9.36□□□□□ -0.91
Clrn1Q8K445 Olfr1060-ps1-201ENSMUST00000118335 943 ntBASIC9.36□□□□□ -0.91
Clrn1Q8K445 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC9.36□□□□□ -0.91
Clrn1Q8K445 Gm4993-201ENSMUST00000118719 1174 ntBASIC9.36□□□□□ -0.91
Clrn1Q8K445 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Clrn1Q8K445 Gm13938-201ENSMUST00000156809 493 ntTSL 5 BASIC9.36□□□□□ -0.91
Clrn1Q8K445 Gm22609-201ENSMUST00000158286 121 ntBASIC9.36□□□□□ -0.91
Clrn1Q8K445 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC9.36□□□□□ -0.91
Clrn1Q8K445 Gm17090-201ENSMUST00000171768 490 ntTSL 5 BASIC9.36□□□□□ -0.91
Clrn1Q8K445 Siglech-208ENSMUST00000173835 833 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Clrn1Q8K445 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Clrn1Q8K445 Gm19668-201ENSMUST00000178581 747 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Clrn1Q8K445 2900076A07Rik-201ENSMUST00000180385 914 ntTSL 3 BASIC9.36□□□□□ -0.91
Clrn1Q8K445 Gm27444-201ENSMUST00000184157 137 ntBASIC9.36□□□□□ -0.91
Clrn1Q8K445 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Clrn1Q8K445 Gm31466-201ENSMUST00000195457 916 ntTSL 3 BASIC9.36□□□□□ -0.91
Clrn1Q8K445 Gm17889-201ENSMUST00000198410 598 ntBASIC9.36□□□□□ -0.91
Clrn1Q8K445 Gm18670-201ENSMUST00000218712 696 ntBASIC9.36□□□□□ -0.91
Clrn1Q8K445 Gm2696-201ENSMUST00000220062 723 ntAPPRIS P5 BASIC9.36□□□□□ -0.91
Clrn1Q8K445 AC122824.1-201ENSMUST00000221705 828 ntTSL 3 BASIC9.36□□□□□ -0.91
Clrn1Q8K445 AC134913.2-201ENSMUST00000225017 771 ntBASIC9.36□□□□□ -0.91
Clrn1Q8K445 AC161877.1-201ENSMUST00000227736 699 ntBASIC9.36□□□□□ -0.91
Clrn1Q8K445 AC154213.1-201ENSMUST00000228234 583 ntBASIC9.36□□□□□ -0.91
Clrn1Q8K445 Lipa-201ENSMUST00000049572 2969 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Clrn1Q8K445 Gm10617-201ENSMUST00000098368 1172 ntBASIC9.36□□□□□ -0.91
Clrn1Q8K445 Snd1-201ENSMUST00000001460 3482 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Clrn1Q8K445 Gm43585-201ENSMUST00000199375 1403 ntBASIC9.36□□□□□ -0.91
Clrn1Q8K445 Rack1-201ENSMUST00000020640 1447 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Clrn1Q8K445 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC9.36□□□□□ -0.91
Clrn1Q8K445 Casq2-205ENSMUST00000165540 2434 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Clrn1Q8K445 Zc3hav1-203ENSMUST00000114900 4944 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Clrn1Q8K445 Nckap5-208ENSMUST00000161954 7090 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Clrn1Q8K445 Map4k4-217ENSMUST00000195636 4082 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Clrn1Q8K445 Ccna1-201ENSMUST00000029368 1560 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Clrn1Q8K445 C8b-202ENSMUST00000065072 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Clrn1Q8K445 Nbr1-201ENSMUST00000071537 3239 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Clrn1Q8K445 Zbtb25-202ENSMUST00000176102 2707 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Clrn1Q8K445 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Clrn1Q8K445 Rffl-201ENSMUST00000021036 1719 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Clrn1Q8K445 Cntrl-206ENSMUST00000113037 5970 ntTSL 5 BASIC9.36□□□□□ -0.91
Clrn1Q8K445 Cx3cl1-201ENSMUST00000034230 3315 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Clrn1Q8K445 Mlxipl-201ENSMUST00000005507 3622 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Clrn1Q8K445 Rufy4-201ENSMUST00000080167 2306 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Clrn1Q8K445 Ank1-215ENSMUST00000173248 7100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Clrn1Q8K445 Gm42571-201ENSMUST00000201197 2464 ntBASIC9.36□□□□□ -0.91
Clrn1Q8K445 Topaz1-201ENSMUST00000178679 5030 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Clrn1Q8K445 Col4a5-201ENSMUST00000112930 6285 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Clrn1Q8K445 2900060N12Rik-201ENSMUST00000221412 3721 ntBASIC9.35□□□□□ -0.91
Clrn1Q8K445 Sqor-202ENSMUST00000110506 1985 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Clrn1Q8K445 Plscr4-201ENSMUST00000034941 3204 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Clrn1Q8K445 Sncaip-201ENSMUST00000025413 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Clrn1Q8K445 Zfp958-202ENSMUST00000202692 2364 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Clrn1Q8K445 Mia3-202ENSMUST00000109158 2961 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Clrn1Q8K445 Stra6-201ENSMUST00000034880 2993 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Clrn1Q8K445 4930570G19Rik-201ENSMUST00000139363 3112 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Clrn1Q8K445 Zscan29-202ENSMUST00000110661 5072 ntAPPRIS P2 TSL 5 BASIC9.35□□□□□ -0.91
Clrn1Q8K445 Gm14204-202ENSMUST00000123944 5380 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Clrn1Q8K445 Zmiz2-202ENSMUST00000102914 3806 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Clrn1Q8K445 Hist1h4i-201ENSMUST00000102977 727 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Clrn1Q8K445 Celf1-208ENSMUST00000111455 7579 ntAPPRIS P4 TSL 5 BASIC9.35□□□□□ -0.91
Clrn1Q8K445 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Clrn1Q8K445 Gm6276-201ENSMUST00000120159 579 ntBASIC9.35□□□□□ -0.91
Clrn1Q8K445 Gm14370-201ENSMUST00000122460 868 ntBASIC9.35□□□□□ -0.91
Clrn1Q8K445 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Clrn1Q8K445 Gm15273-201ENSMUST00000142302 868 ntBASIC9.35□□□□□ -0.91
Clrn1Q8K445 Gm7023-201ENSMUST00000147295 868 ntBASIC9.35□□□□□ -0.91
Clrn1Q8K445 Ptgds-201ENSMUST00000015234 901 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Clrn1Q8K445 Gm5766-202ENSMUST00000161633 799 ntBASIC9.35□□□□□ -0.91
Clrn1Q8K445 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC9.35□□□□□ -0.91
Clrn1Q8K445 Osgep-207ENSMUST00000162177 1219 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Clrn1Q8K445 Cul4b-201ENSMUST00000016681 3354 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Clrn1Q8K445 Gm14357-201ENSMUST00000178352 868 ntBASIC9.35□□□□□ -0.91
Clrn1Q8K445 Gm14361-201ENSMUST00000178547 868 ntBASIC9.35□□□□□ -0.91
Clrn1Q8K445 Gm14348-201ENSMUST00000179183 868 ntBASIC9.35□□□□□ -0.91
Clrn1Q8K445 Gm20091-201ENSMUST00000179683 189 ntBASIC9.35□□□□□ -0.91
Clrn1Q8K445 Gm17733-201ENSMUST00000181883 1048 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Clrn1Q8K445 Gm29487-201ENSMUST00000190146 256 ntBASIC9.35□□□□□ -0.91
Clrn1Q8K445 Gm9409-201ENSMUST00000197017 316 ntBASIC9.35□□□□□ -0.91
Clrn1Q8K445 Gm43778-201ENSMUST00000199438 199 ntBASIC9.35□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 94.3 ms