Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 4933414I15Rik-201ENSMUST00000109123 2206 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Esrp2-201ENSMUST00000115979 3536 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Kirrel3-205ENSMUST00000187182 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Thbs3-202ENSMUST00000119084 2993 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Gm45076-201ENSMUST00000207517 1517 ntTSL 5 BASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Dqx1-201ENSMUST00000077502 3257 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Tns1-201ENSMUST00000169786 9966 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Klf10-203ENSMUST00000227920 2144 ntBASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Tmem184b-205ENSMUST00000228002 3315 ntBASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Baiap3-201ENSMUST00000169109 3630 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Gm8152-201ENSMUST00000120842 637 ntBASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Gm3115-202ENSMUST00000177660 618 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Gm6337-203ENSMUST00000177662 618 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Gm3727-202ENSMUST00000178251 618 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Gm27833-201ENSMUST00000184285 124 ntBASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Srgap2-204ENSMUST00000186543 3533 ntTSL 5 BASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Gm7593-201ENSMUST00000187246 644 ntBASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Gm28893-201ENSMUST00000190951 1108 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Gm38038-201ENSMUST00000193803 259 ntBASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Gm18555-201ENSMUST00000197935 584 ntBASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Gm43778-201ENSMUST00000199438 199 ntBASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Gm43452-201ENSMUST00000201873 991 ntBASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Gm7594-201ENSMUST00000218595 871 ntBASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 AC153962.2-201ENSMUST00000219417 550 ntBASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Gm36862-204ENSMUST00000223365 642 ntTSL 3 BASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 CT030652.1-201ENSMUST00000227377 1235 ntBASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 AC169511.1-201ENSMUST00000227639 995 ntBASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 AC164099.1-201ENSMUST00000227780 333 ntBASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Cdh1-201ENSMUST00000000312 4430 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Hemgn-201ENSMUST00000071096 2321 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Hdac7-206ENSMUST00000119670 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Syncrip-207ENSMUST00000174269 3286 ntTSL 5 BASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Gm15612-201ENSMUST00000147542 3118 ntTSL 2 BASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Kpna6-202ENSMUST00000102590 5710 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Carhsp1-201ENSMUST00000008537 2849 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Akap1-203ENSMUST00000107904 2673 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Bpifb9a-201ENSMUST00000088924 2065 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Trim69-201ENSMUST00000036089 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Lrrc15-201ENSMUST00000064606 5310 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Gm42731-201ENSMUST00000201839 1641 ntBASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Gpatch4-201ENSMUST00000029707 1630 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Nrf1-203ENSMUST00000069831 1625 ntTSL 5 BASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Xlr3a-201ENSMUST00000074619 1645 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Gas7-202ENSMUST00000108680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Gm10390-201ENSMUST00000180812 3975 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Gm8848-201ENSMUST00000197270 1343 ntBASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Ank3-237ENSMUST00000183074 4948 ntTSL 5 BASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Bub1b-201ENSMUST00000038341 3668 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Hapln3-203ENSMUST00000206092 3358 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Igf2bp3-201ENSMUST00000031838 4345 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Sf3a3-201ENSMUST00000030734 1820 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Opalin-201ENSMUST00000087176 1838 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sec61a2Q9JLR1 Chad-201ENSMUST00000040418 1680 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Sec61a2Q9JLR1 Mitf-202ENSMUST00000043637 4881 ntTSL 1 (best) BASIC9□□□□□ -0.97
Sec61a2Q9JLR1 Dlgap2-208ENSMUST00000150247 3138 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Sec61a2Q9JLR1 Nkiras1-202ENSMUST00000132374 4598 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Sec61a2Q9JLR1 Arid3b-201ENSMUST00000004780 3785 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Sec61a2Q9JLR1 Parp3-201ENSMUST00000067218 2962 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Sec61a2Q9JLR1 4930480K15Rik-201ENSMUST00000162121 2199 ntTSL 1 (best) BASIC9□□□□□ -0.97
Sec61a2Q9JLR1 Mapk1ip1-202ENSMUST00000118810 1350 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Sec61a2Q9JLR1 Gm14667-201ENSMUST00000119448 1350 ntBASIC9□□□□□ -0.97
Sec61a2Q9JLR1 Gm42714-201ENSMUST00000202063 1364 ntBASIC9□□□□□ -0.97
Sec61a2Q9JLR1 AC154197.1-201ENSMUST00000225136 1382 ntBASIC9□□□□□ -0.97
Sec61a2Q9JLR1 Helz2-201ENSMUST00000094203 9162 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Sec61a2Q9JLR1 1700010I14Rik-203ENSMUST00000151609 1853 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Sec61a2Q9JLR1 Upb1-201ENSMUST00000039925 3042 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Sec61a2Q9JLR1 Igsf11-202ENSMUST00000114706 1578 ntTSL 1 (best) BASIC9□□□□□ -0.97
Sec61a2Q9JLR1 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Sec61a2Q9JLR1 Gm35715-201ENSMUST00000197421 2054 ntTSL 1 (best) BASIC9□□□□□ -0.97
Sec61a2Q9JLR1 Cdc25b-201ENSMUST00000028804 3089 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Sec61a2Q9JLR1 AU040320-203ENSMUST00000102608 4073 ntAPPRIS P4 TSL 1 (best) BASIC9□□□□□ -0.97
Sec61a2Q9JLR1 Zfp541-201ENSMUST00000108509 4561 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Sec61a2Q9JLR1 Olfr30-202ENSMUST00000215691 2404 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Sec61a2Q9JLR1 Pear1-202ENSMUST00000079083 4297 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Sec61a2Q9JLR1 Mfsd11-201ENSMUST00000021173 3298 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Sec61a2Q9JLR1 Zfp709-203ENSMUST00000188685 7186 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Sec61a2Q9JLR1 Zbtb34-201ENSMUST00000091037 6510 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Sec61a2Q9JLR1 Gstm6-204ENSMUST00000106684 1179 ntTSL 1 (best) BASIC9□□□□□ -0.97
Sec61a2Q9JLR1 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC9□□□□□ -0.97
Sec61a2Q9JLR1 1810058I24Rik-201ENSMUST00000130875 690 ntTSL 1 (best) BASIC9□□□□□ -0.97
Sec61a2Q9JLR1 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Sec61a2Q9JLR1 Gm12906-201ENSMUST00000154610 441 ntBASIC9□□□□□ -0.97
Sec61a2Q9JLR1 Vmn2r-ps13-201ENSMUST00000176920 606 ntBASIC9□□□□□ -0.97
Sec61a2Q9JLR1 Gm20821-202ENSMUST00000180352 684 ntAPPRIS P1 BASIC9□□□□□ -0.97
Sec61a2Q9JLR1 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Sec61a2Q9JLR1 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC9□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms