Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm46329-201ENSMUST00000218373 609 ntTSL 5 BASIC9.4□□□□□ -0.9
Clrn1Q8K445 AC122357.1-202ENSMUST00000221436 633 ntTSL 2 BASIC9.4□□□□□ -0.9
Clrn1Q8K445 4930533K18Rik-201ENSMUST00000058942 1259 ntTSL 5 BASIC9.4□□□□□ -0.9
Clrn1Q8K445 Exosc9-201ENSMUST00000029269 1617 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Clrn1Q8K445 Gm46218-202ENSMUST00000215520 1956 ntBASIC9.4□□□□□ -0.9
Clrn1Q8K445 Cdk20-201ENSMUST00000021939 4118 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Clrn1Q8K445 Arhgap6-205ENSMUST00000112131 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Clrn1Q8K445 Tnr-201ENSMUST00000111669 4424 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Clrn1Q8K445 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Clrn1Q8K445 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC9.4□□□□□ -0.9
Clrn1Q8K445 Hcar2-201ENSMUST00000057145 1930 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Clrn1Q8K445 Glb1l2-202ENSMUST00000066560 3688 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Clrn1Q8K445 Usp45-202ENSMUST00000065111 6003 ntAPPRIS P3 TSL 5 BASIC9.4□□□□□ -0.9
Clrn1Q8K445 Raf1-202ENSMUST00000112949 2946 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Clrn1Q8K445 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Clrn1Q8K445 Nifk-201ENSMUST00000027626 1889 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Clrn1Q8K445 Gm15535-202ENSMUST00000148478 1519 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Clrn1Q8K445 Srgap2-204ENSMUST00000186543 3533 ntTSL 5 BASIC9.4□□□□□ -0.91
Clrn1Q8K445 Man2c1-211ENSMUST00000160147 3820 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Clrn1Q8K445 1810034E14Rik-201ENSMUST00000181403 1805 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Clrn1Q8K445 Sgca-201ENSMUST00000100551 1465 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Clrn1Q8K445 March6-201ENSMUST00000090227 6260 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Clrn1Q8K445 Ubap2l-203ENSMUST00000090908 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Clrn1Q8K445 Eef1d-218ENSMUST00000154584 1721 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Clrn1Q8K445 AC104200.1-201ENSMUST00000224527 1746 ntBASIC9.39□□□□□ -0.91
Clrn1Q8K445 Mmgt1-201ENSMUST00000059899 4234 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Clrn1Q8K445 Fgfr1-213ENSMUST00000167764 2915 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Clrn1Q8K445 Actl9-201ENSMUST00000174088 1373 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Clrn1Q8K445 Nup133-201ENSMUST00000044795 5808 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Clrn1Q8K445 Pus7l-201ENSMUST00000049151 2840 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Clrn1Q8K445 Nprl3-202ENSMUST00000109389 1642 ntAPPRIS ALT1 TSL 5 BASIC9.39□□□□□ -0.91
Clrn1Q8K445 Mrpl24-202ENSMUST00000119968 1339 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Clrn1Q8K445 Gm42651-201ENSMUST00000199851 1339 ntBASIC9.39□□□□□ -0.91
Clrn1Q8K445 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Clrn1Q8K445 Gm16299-201ENSMUST00000162724 2766 ntTSL 3 BASIC9.39□□□□□ -0.91
Clrn1Q8K445 Gm37608-201ENSMUST00000195696 1880 ntBASIC9.39□□□□□ -0.91
Clrn1Q8K445 D030055H07Rik-201ENSMUST00000143956 2712 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Clrn1Q8K445 Fes-208ENSMUST00000206728 2707 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Clrn1Q8K445 Usp45-201ENSMUST00000040429 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Clrn1Q8K445 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Clrn1Q8K445 Ogdh-204ENSMUST00000101554 4106 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Clrn1Q8K445 Slc31a2-202ENSMUST00000107467 868 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Clrn1Q8K445 Rps9-205ENSMUST00000126562 896 ntTSL 2 BASIC9.39□□□□□ -0.91
Clrn1Q8K445 Gm26356-201ENSMUST00000158217 283 ntBASIC9.39□□□□□ -0.91
Clrn1Q8K445 Gm6612-201ENSMUST00000170777 395 ntBASIC9.39□□□□□ -0.91
Clrn1Q8K445 Rps18-206ENSMUST00000174609 527 ntTSL 2 BASIC9.39□□□□□ -0.91
Clrn1Q8K445 Gm4960-201ENSMUST00000182928 1001 ntBASIC9.39□□□□□ -0.91
Clrn1Q8K445 Gm31678-201ENSMUST00000198262 454 ntTSL 3 BASIC9.39□□□□□ -0.91
Clrn1Q8K445 Gm7924-201ENSMUST00000203975 785 ntBASIC9.39□□□□□ -0.91
Clrn1Q8K445 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC9.39□□□□□ -0.91
Clrn1Q8K445 Gm45359-201ENSMUST00000210635 427 ntBASIC9.39□□□□□ -0.91
Clrn1Q8K445 AC159376.1-201ENSMUST00000218504 630 ntBASIC9.39□□□□□ -0.91
Clrn1Q8K445 Gm7441-201ENSMUST00000220697 1074 ntBASIC9.39□□□□□ -0.91
Clrn1Q8K445 AC154757.2-201ENSMUST00000228885 743 ntBASIC9.39□□□□□ -0.91
Clrn1Q8K445 Myl10-201ENSMUST00000005611 688 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Clrn1Q8K445 Gm8325-201ENSMUST00000099086 453 ntBASIC9.39□□□□□ -0.91
Clrn1Q8K445 Arid3b-201ENSMUST00000004780 3785 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Clrn1Q8K445 Cish-201ENSMUST00000085102 2850 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Clrn1Q8K445 Ap1m2-202ENSMUST00000115433 2586 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Clrn1Q8K445 Hapln3-203ENSMUST00000206092 3358 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Clrn1Q8K445 Amd-ps3-201ENSMUST00000072796 1496 ntBASIC9.39□□□□□ -0.91
Clrn1Q8K445 Mid1-204ENSMUST00000112104 3860 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Clrn1Q8K445 Sh3bgrl2-203ENSMUST00000188030 2549 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Clrn1Q8K445 Gm9220-201ENSMUST00000190721 2544 ntBASIC9.39□□□□□ -0.91
Clrn1Q8K445 Vmn1r213-204ENSMUST00000228758 5975 ntAPPRIS P2 BASIC9.39□□□□□ -0.91
Clrn1Q8K445 Gm6225-201ENSMUST00000181558 1700 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Clrn1Q8K445 Fam53b-202ENSMUST00000097998 4341 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Clrn1Q8K445 Mre11a-201ENSMUST00000034405 3286 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Clrn1Q8K445 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Clrn1Q8K445 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Clrn1Q8K445 Tmem252-201ENSMUST00000057243 2462 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Clrn1Q8K445 Fbxl12-206ENSMUST00000148631 3756 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Clrn1Q8K445 Galnt15-201ENSMUST00000022460 6326 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Clrn1Q8K445 Boc-201ENSMUST00000114634 4451 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Clrn1Q8K445 Zfp532-208ENSMUST00000182852 5476 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Clrn1Q8K445 Disp2-203ENSMUST00000110843 2949 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Clrn1Q8K445 Gm44907-201ENSMUST00000207423 1633 ntBASIC9.38□□□□□ -0.91
Clrn1Q8K445 Vmn1r199-204ENSMUST00000227846 5523 ntAPPRIS ALT2 BASIC9.38□□□□□ -0.91
Clrn1Q8K445 Dnajb13-204ENSMUST00000207405 2592 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Clrn1Q8K445 Rsf1-201ENSMUST00000107153 11124 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Clrn1Q8K445 Gm26953-209ENSMUST00000213051 2087 ntTSL 5 BASIC9.38□□□□□ -0.91
Clrn1Q8K445 Arid1b-203ENSMUST00000115799 9888 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Clrn1Q8K445 Acss3-203ENSMUST00000165067 4696 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Clrn1Q8K445 Arhgap26-216ENSMUST00000155576 2280 ntAPPRIS ALT1 TSL 5 BASIC9.38□□□□□ -0.91
Clrn1Q8K445 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Clrn1Q8K445 Gm14997-201ENSMUST00000119232 636 ntBASIC9.38□□□□□ -0.91
Clrn1Q8K445 Gm5054-201ENSMUST00000119351 453 ntBASIC9.38□□□□□ -0.91
Clrn1Q8K445 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC9.38□□□□□ -0.91
Clrn1Q8K445 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC9.38□□□□□ -0.91
Clrn1Q8K445 Gm5501-201ENSMUST00000165917 832 ntBASIC9.38□□□□□ -0.91
Clrn1Q8K445 Rergl-201ENSMUST00000170650 958 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Clrn1Q8K445 Gm17107-201ENSMUST00000170983 553 ntBASIC9.38□□□□□ -0.91
Clrn1Q8K445 Gm8203-201ENSMUST00000173192 387 ntBASIC9.38□□□□□ -0.91
Clrn1Q8K445 Gm24368-201ENSMUST00000175388 106 ntBASIC9.38□□□□□ -0.91
Clrn1Q8K445 Gm4705-201ENSMUST00000177415 354 ntBASIC9.38□□□□□ -0.91
Clrn1Q8K445 Gm9621-201ENSMUST00000183322 1003 ntBASIC9.38□□□□□ -0.91
Clrn1Q8K445 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC9.38□□□□□ -0.91
Clrn1Q8K445 Gm37858-201ENSMUST00000192759 1231 ntBASIC9.38□□□□□ -0.91
Clrn1Q8K445 Gm44131-201ENSMUST00000203036 394 ntBASIC9.38□□□□□ -0.91
Clrn1Q8K445 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms