Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm14164-202ENSMUST00000128577 1999 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Clrn1Q8K445 Gm5403-201ENSMUST00000117105 2795 ntBASIC9.45□□□□□ -0.9
Clrn1Q8K445 Sms-201ENSMUST00000112529 3717 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Clrn1Q8K445 Gm23255-201ENSMUST00000102244 110 ntBASIC9.45□□□□□ -0.9
Clrn1Q8K445 Selenot-ps-201ENSMUST00000119098 593 ntBASIC9.45□□□□□ -0.9
Clrn1Q8K445 Gm13397-201ENSMUST00000119562 878 ntBASIC9.45□□□□□ -0.9
Clrn1Q8K445 Gstm1-202ENSMUST00000126593 828 ntTSL 3 BASIC9.45□□□□□ -0.9
Clrn1Q8K445 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC9.45□□□□□ -0.9
Clrn1Q8K445 Gm15839-201ENSMUST00000138684 612 ntTSL 3 BASIC9.45□□□□□ -0.9
Clrn1Q8K445 Gm12207-201ENSMUST00000143016 494 ntTSL 2 BASIC9.45□□□□□ -0.9
Clrn1Q8K445 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Clrn1Q8K445 Gm22994-201ENSMUST00000175422 82 ntBASIC9.45□□□□□ -0.9
Clrn1Q8K445 Gm5561-201ENSMUST00000178932 480 ntBASIC9.45□□□□□ -0.9
Clrn1Q8K445 Ap1g1-206ENSMUST00000179104 1096 ntBASIC9.45□□□□□ -0.9
Clrn1Q8K445 5730420D15Rik-201ENSMUST00000181781 1182 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Clrn1Q8K445 Gm3466-201ENSMUST00000181797 1192 ntBASIC9.45□□□□□ -0.9
Clrn1Q8K445 Gm37350-201ENSMUST00000192782 313 ntTSL 5 BASIC9.45□□□□□ -0.9
Clrn1Q8K445 4930573C15Rik-201ENSMUST00000197707 777 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Clrn1Q8K445 Gm17815-201ENSMUST00000198305 895 ntBASIC9.45□□□□□ -0.9
Clrn1Q8K445 AC153962.2-201ENSMUST00000219417 550 ntBASIC9.45□□□□□ -0.9
Clrn1Q8K445 Gm9531-201ENSMUST00000055820 638 ntTSL 3 BASIC9.45□□□□□ -0.9
Clrn1Q8K445 Parp3-201ENSMUST00000067218 2962 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Clrn1Q8K445 Tdpoz4-201ENSMUST00000075953 1113 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Clrn1Q8K445 Gm26440-201ENSMUST00000082591 129 ntBASIC9.45□□□□□ -0.9
Clrn1Q8K445 Olfr1513-201ENSMUST00000089739 942 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Clrn1Q8K445 Cacna1c-222ENSMUST00000190285 6585 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Clrn1Q8K445 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Clrn1Q8K445 Gm9260-201ENSMUST00000199781 1380 ntBASIC9.45□□□□□ -0.9
Clrn1Q8K445 Greb1-201ENSMUST00000048064 7940 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Clrn1Q8K445 Syncrip-207ENSMUST00000174269 3286 ntTSL 5 BASIC9.45□□□□□ -0.9
Clrn1Q8K445 Prdx6-202ENSMUST00000071718 2387 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Clrn1Q8K445 Il16-201ENSMUST00000001792 5260 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Clrn1Q8K445 Gabrb3-206ENSMUST00000196198 4348 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Clrn1Q8K445 Sun1-204ENSMUST00000110882 2454 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Clrn1Q8K445 B930082K07Rik-201ENSMUST00000181046 2478 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Clrn1Q8K445 Gm45330-201ENSMUST00000209681 1575 ntTSL 5 BASIC9.45□□□□□ -0.9
Clrn1Q8K445 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Clrn1Q8K445 Epb41-206ENSMUST00000105974 4844 ntTSL 5 BASIC9.45□□□□□ -0.9
Clrn1Q8K445 Fam71e2-202ENSMUST00000174409 2716 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Clrn1Q8K445 Tacr1-202ENSMUST00000203775 4933 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Clrn1Q8K445 Gm36426-201ENSMUST00000222903 1795 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Clrn1Q8K445 Isx-201ENSMUST00000034034 1793 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Clrn1Q8K445 Klhdc7a-201ENSMUST00000105031 7807 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Clrn1Q8K445 Gria4-201ENSMUST00000027020 5441 ntAPPRIS ALT1 TSL 5 BASIC9.45□□□□□ -0.9
Clrn1Q8K445 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Clrn1Q8K445 Plekhb2-201ENSMUST00000027297 3279 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Clrn1Q8K445 Cd300a-202ENSMUST00000106582 4645 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Clrn1Q8K445 Gsdmc3-203ENSMUST00000190682 2140 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Clrn1Q8K445 Gm37333-201ENSMUST00000192904 2251 ntBASIC9.44□□□□□ -0.9
Clrn1Q8K445 Parp1-201ENSMUST00000027777 3873 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Clrn1Q8K445 Slc7a3-202ENSMUST00000101362 2371 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Clrn1Q8K445 Apol7a-204ENSMUST00000176074 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Clrn1Q8K445 Ank3-220ENSMUST00000182439 2586 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Clrn1Q8K445 Adamts4-202ENSMUST00000111315 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Clrn1Q8K445 Rbm27-202ENSMUST00000091920 6266 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Clrn1Q8K445 AC131586.1-201ENSMUST00000228844 2964 ntBASIC9.44□□□□□ -0.9
Clrn1Q8K445 Tmem150c-201ENSMUST00000063192 3084 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Clrn1Q8K445 Apobr-201ENSMUST00000039522 3685 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Clrn1Q8K445 Gm23769-201ENSMUST00000104441 121 ntBASIC9.44□□□□□ -0.9
Clrn1Q8K445 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Clrn1Q8K445 Gm14274-201ENSMUST00000117182 615 ntBASIC9.44□□□□□ -0.9
Clrn1Q8K445 Dhx40-201ENSMUST00000018569 3813 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Clrn1Q8K445 Gm5621-201ENSMUST00000187303 640 ntBASIC9.44□□□□□ -0.9
Clrn1Q8K445 Zcwpw2-203ENSMUST00000187803 372 ntBASIC9.44□□□□□ -0.9
Clrn1Q8K445 Cpsf4l-201ENSMUST00000018871 1235 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Clrn1Q8K445 Gm8525-201ENSMUST00000189674 861 ntBASIC9.44□□□□□ -0.9
Clrn1Q8K445 Gm6518-201ENSMUST00000208450 342 ntBASIC9.44□□□□□ -0.9
Clrn1Q8K445 Gm5650-201ENSMUST00000209641 598 ntBASIC9.44□□□□□ -0.9
Clrn1Q8K445 AC155266.1-201ENSMUST00000220762 904 ntBASIC9.44□□□□□ -0.9
Clrn1Q8K445 Gm18363-201ENSMUST00000221671 730 ntBASIC9.44□□□□□ -0.9
Clrn1Q8K445 Tmem89-201ENSMUST00000026744 538 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Clrn1Q8K445 Cd1d2-201ENSMUST00000041920 1243 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Clrn1Q8K445 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Clrn1Q8K445 Gm7125-201ENSMUST00000093430 273 ntBASIC9.44□□□□□ -0.9
Clrn1Q8K445 Galnt16-201ENSMUST00000021558 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Clrn1Q8K445 Dcx-204ENSMUST00000112856 1333 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Clrn1Q8K445 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Clrn1Q8K445 Gm14667-201ENSMUST00000119448 1350 ntBASIC9.44□□□□□ -0.9
Clrn1Q8K445 Fcrla-203ENSMUST00000159171 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Clrn1Q8K445 Mkl1-203ENSMUST00000131235 4222 ntTSL 5 BASIC9.44□□□□□ -0.9
Clrn1Q8K445 Gm45193-201ENSMUST00000204686 1552 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Clrn1Q8K445 Gm11427-201ENSMUST00000117952 1696 ntBASIC9.44□□□□□ -0.9
Clrn1Q8K445 Cyp2d9-201ENSMUST00000089129 1651 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Clrn1Q8K445 Olfr287-204ENSMUST00000170618 1776 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
Clrn1Q8K445 CT025681.1-201ENSMUST00000225453 1855 ntBASIC9.44□□□□□ -0.9
Clrn1Q8K445 Gemin8-201ENSMUST00000056410 1862 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Clrn1Q8K445 Elf2-213ENSMUST00000195432 2161 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Clrn1Q8K445 C820005J03Rik-201ENSMUST00000195997 2312 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Clrn1Q8K445 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC9.44□□□□□ -0.9
Clrn1Q8K445 Dytn-201ENSMUST00000090313 2427 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Clrn1Q8K445 Arhgap6-204ENSMUST00000112129 2487 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Clrn1Q8K445 Gpm6b-204ENSMUST00000112226 3174 ntAPPRIS ALT1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Clrn1Q8K445 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Clrn1Q8K445 Gm37759-201ENSMUST00000194155 3246 ntBASIC9.44□□□□□ -0.9
Clrn1Q8K445 Arhgap17-202ENSMUST00000106442 3336 ntAPPRIS P4 TSL 1 (best) BASIC9.44□□□□□ -0.9
Clrn1Q8K445 Atg13-202ENSMUST00000076803 3551 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Clrn1Q8K445 Apex2-205ENSMUST00000112725 3613 ntTSL 5 BASIC9.44□□□□□ -0.9
Clrn1Q8K445 Wdr78-201ENSMUST00000036451 3671 ntTSL 5 BASIC9.44□□□□□ -0.9
Clrn1Q8K445 Ano2-204ENSMUST00000160496 3925 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Clrn1Q8K445 Zic3-201ENSMUST00000088627 3949 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms