Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mrpl40Q9Z2Q5 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mrpl40Q9Z2Q5 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mrpl40Q9Z2Q5 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Mrpl40Q9Z2Q5 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.51■□□□□ 0.71
Mrpl40Q9Z2Q5 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mrpl40Q9Z2Q5 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mrpl40Q9Z2Q5 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Mrpl40Q9Z2Q5 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Mrpl40Q9Z2Q5 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Mrpl40Q9Z2Q5 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mrpl40Q9Z2Q5 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Mrpl40Q9Z2Q5 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.5■□□□□ 0.71
Mrpl40Q9Z2Q5 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Mrpl40Q9Z2Q5 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Mrpl40Q9Z2Q5 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Mrpl40Q9Z2Q5 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Mrpl40Q9Z2Q5 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Mrpl40Q9Z2Q5 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Mrpl40Q9Z2Q5 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Mrpl40Q9Z2Q5 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.49■□□□□ 0.71
Mrpl40Q9Z2Q5 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Mrpl40Q9Z2Q5 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.49■□□□□ 0.71
Mrpl40Q9Z2Q5 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Mrpl40Q9Z2Q5 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Mrpl40Q9Z2Q5 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.49■□□□□ 0.71
Mrpl40Q9Z2Q5 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Mrpl40Q9Z2Q5 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Mrpl40Q9Z2Q5 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.48■□□□□ 0.71
Mrpl40Q9Z2Q5 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Mrpl40Q9Z2Q5 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Mrpl40Q9Z2Q5 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Mrpl40Q9Z2Q5 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.48■□□□□ 0.71
Mrpl40Q9Z2Q5 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.48■□□□□ 0.71
Mrpl40Q9Z2Q5 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
Mrpl40Q9Z2Q5 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Mrpl40Q9Z2Q5 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Mrpl40Q9Z2Q5 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Mrpl40Q9Z2Q5 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Mrpl40Q9Z2Q5 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Mrpl40Q9Z2Q5 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Mrpl40Q9Z2Q5 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Mrpl40Q9Z2Q5 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mrpl40Q9Z2Q5 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mrpl40Q9Z2Q5 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mrpl40Q9Z2Q5 Spcs1-204ENSMUST00000226782 949 ntBASIC19.47■□□□□ 0.71
Mrpl40Q9Z2Q5 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mrpl40Q9Z2Q5 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mrpl40Q9Z2Q5 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Mrpl40Q9Z2Q5 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mrpl40Q9Z2Q5 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Mrpl40Q9Z2Q5 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Mrpl40Q9Z2Q5 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Mrpl40Q9Z2Q5 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Mrpl40Q9Z2Q5 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Mrpl40Q9Z2Q5 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Mrpl40Q9Z2Q5 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Mrpl40Q9Z2Q5 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Mrpl40Q9Z2Q5 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
Mrpl40Q9Z2Q5 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Mrpl40Q9Z2Q5 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Mrpl40Q9Z2Q5 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Mrpl40Q9Z2Q5 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Mrpl40Q9Z2Q5 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Mrpl40Q9Z2Q5 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Mrpl40Q9Z2Q5 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
Mrpl40Q9Z2Q5 Gm26833-201ENSMUST00000180899 440 ntBASIC19.45■□□□□ 0.7
Mrpl40Q9Z2Q5 Gm5874-201ENSMUST00000096101 508 ntBASIC19.45■□□□□ 0.7
Mrpl40Q9Z2Q5 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Mrpl40Q9Z2Q5 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Mrpl40Q9Z2Q5 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Mrpl40Q9Z2Q5 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Mrpl40Q9Z2Q5 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Mrpl40Q9Z2Q5 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Mrpl40Q9Z2Q5 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mrpl40Q9Z2Q5 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.44■□□□□ 0.7
Mrpl40Q9Z2Q5 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mrpl40Q9Z2Q5 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.44■□□□□ 0.7
Mrpl40Q9Z2Q5 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mrpl40Q9Z2Q5 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.44■□□□□ 0.7
Mrpl40Q9Z2Q5 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mrpl40Q9Z2Q5 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.44■□□□□ 0.7
Mrpl40Q9Z2Q5 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Mrpl40Q9Z2Q5 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mrpl40Q9Z2Q5 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Mrpl40Q9Z2Q5 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Mrpl40Q9Z2Q5 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mrpl40Q9Z2Q5 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mrpl40Q9Z2Q5 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mrpl40Q9Z2Q5 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mrpl40Q9Z2Q5 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mrpl40Q9Z2Q5 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mrpl40Q9Z2Q5 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mrpl40Q9Z2Q5 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.43■□□□□ 0.7
Mrpl40Q9Z2Q5 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.43■□□□□ 0.7
Mrpl40Q9Z2Q5 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mrpl40Q9Z2Q5 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mrpl40Q9Z2Q5 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Mrpl40Q9Z2Q5 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mrpl40Q9Z2Q5 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms