Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.9■□□□□ 0.62
Cldn9Q9Z0S7 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.9■□□□□ 0.62
Cldn9Q9Z0S7 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cldn9Q9Z0S7 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
Cldn9Q9Z0S7 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cldn9Q9Z0S7 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cldn9Q9Z0S7 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cldn9Q9Z0S7 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cldn9Q9Z0S7 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cldn9Q9Z0S7 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.89■□□□□ 0.61
Cldn9Q9Z0S7 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.89■□□□□ 0.61
Cldn9Q9Z0S7 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
Cldn9Q9Z0S7 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cldn9Q9Z0S7 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cldn9Q9Z0S7 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cldn9Q9Z0S7 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cldn9Q9Z0S7 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cldn9Q9Z0S7 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cldn9Q9Z0S7 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cldn9Q9Z0S7 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.88■□□□□ 0.61
Cldn9Q9Z0S7 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cldn9Q9Z0S7 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Cldn9Q9Z0S7 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cldn9Q9Z0S7 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cldn9Q9Z0S7 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cldn9Q9Z0S7 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.87■□□□□ 0.61
Cldn9Q9Z0S7 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.87■□□□□ 0.61
Cldn9Q9Z0S7 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cldn9Q9Z0S7 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cldn9Q9Z0S7 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cldn9Q9Z0S7 Gm9847-201ENSMUST00000052528 599 ntBASIC18.87■□□□□ 0.61
Cldn9Q9Z0S7 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cldn9Q9Z0S7 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cldn9Q9Z0S7 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cldn9Q9Z0S7 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.86■□□□□ 0.61
Cldn9Q9Z0S7 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cldn9Q9Z0S7 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
Cldn9Q9Z0S7 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cldn9Q9Z0S7 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Cldn9Q9Z0S7 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.86■□□□□ 0.61
Cldn9Q9Z0S7 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.86■□□□□ 0.61
Cldn9Q9Z0S7 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cldn9Q9Z0S7 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cldn9Q9Z0S7 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cldn9Q9Z0S7 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cldn9Q9Z0S7 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cldn9Q9Z0S7 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
Cldn9Q9Z0S7 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.85■□□□□ 0.61
Cldn9Q9Z0S7 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cldn9Q9Z0S7 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cldn9Q9Z0S7 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cldn9Q9Z0S7 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cldn9Q9Z0S7 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cldn9Q9Z0S7 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cldn9Q9Z0S7 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cldn9Q9Z0S7 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cldn9Q9Z0S7 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cldn9Q9Z0S7 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cldn9Q9Z0S7 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Cldn9Q9Z0S7 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cldn9Q9Z0S7 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Cldn9Q9Z0S7 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cldn9Q9Z0S7 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cldn9Q9Z0S7 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cldn9Q9Z0S7 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cldn9Q9Z0S7 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cldn9Q9Z0S7 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cldn9Q9Z0S7 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
Cldn9Q9Z0S7 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cldn9Q9Z0S7 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cldn9Q9Z0S7 AA386476-201ENSMUST00000098781 1665 ntBASIC18.83■□□□□ 0.61
Cldn9Q9Z0S7 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cldn9Q9Z0S7 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cldn9Q9Z0S7 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.83■□□□□ 0.6
Cldn9Q9Z0S7 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cldn9Q9Z0S7 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cldn9Q9Z0S7 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cldn9Q9Z0S7 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cldn9Q9Z0S7 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cldn9Q9Z0S7 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.83■□□□□ 0.6
Cldn9Q9Z0S7 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cldn9Q9Z0S7 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn9Q9Z0S7 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn9Q9Z0S7 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
Cldn9Q9Z0S7 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn9Q9Z0S7 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.82■□□□□ 0.6
Cldn9Q9Z0S7 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn9Q9Z0S7 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn9Q9Z0S7 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.82■□□□□ 0.6
Cldn9Q9Z0S7 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Cldn9Q9Z0S7 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn9Q9Z0S7 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.82■□□□□ 0.6
Cldn9Q9Z0S7 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.82■□□□□ 0.6
Cldn9Q9Z0S7 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Cldn9Q9Z0S7 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn9Q9Z0S7 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Cldn9Q9Z0S7 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn9Q9Z0S7 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn9Q9Z0S7 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn9Q9Z0S7 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms