Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.79■□□□□ 0.6
Ube4bQ9ES00 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ube4bQ9ES00 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ube4bQ9ES00 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ube4bQ9ES00 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.79■□□□□ 0.6
Ube4bQ9ES00 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Ube4bQ9ES00 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ube4bQ9ES00 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
Ube4bQ9ES00 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ube4bQ9ES00 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Ube4bQ9ES00 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ube4bQ9ES00 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ube4bQ9ES00 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ube4bQ9ES00 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.78■□□□□ 0.6
Ube4bQ9ES00 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Ube4bQ9ES00 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ube4bQ9ES00 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ube4bQ9ES00 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ube4bQ9ES00 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ube4bQ9ES00 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.78■□□□□ 0.6
Ube4bQ9ES00 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ube4bQ9ES00 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ube4bQ9ES00 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ube4bQ9ES00 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ube4bQ9ES00 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.77■□□□□ 0.6
Ube4bQ9ES00 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Ube4bQ9ES00 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.6
Ube4bQ9ES00 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Ube4bQ9ES00 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ube4bQ9ES00 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.77■□□□□ 0.6
Ube4bQ9ES00 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.77■□□□□ 0.6
Ube4bQ9ES00 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.77■□□□□ 0.6
Ube4bQ9ES00 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ube4bQ9ES00 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Ube4bQ9ES00 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ube4bQ9ES00 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ube4bQ9ES00 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ube4bQ9ES00 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ube4bQ9ES00 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ube4bQ9ES00 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ube4bQ9ES00 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.76■□□□□ 0.59
Ube4bQ9ES00 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.76■□□□□ 0.59
Ube4bQ9ES00 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ube4bQ9ES00 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ube4bQ9ES00 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ube4bQ9ES00 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ube4bQ9ES00 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ube4bQ9ES00 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Ube4bQ9ES00 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ube4bQ9ES00 Grk6-206ENSMUST00000224995 2971 ntBASIC18.75■□□□□ 0.59
Ube4bQ9ES00 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ube4bQ9ES00 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ube4bQ9ES00 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ube4bQ9ES00 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ube4bQ9ES00 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ube4bQ9ES00 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ube4bQ9ES00 Gm10420-201ENSMUST00000121713 882 ntBASIC18.75■□□□□ 0.59
Ube4bQ9ES00 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ube4bQ9ES00 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Ube4bQ9ES00 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Ube4bQ9ES00 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ube4bQ9ES00 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ube4bQ9ES00 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ube4bQ9ES00 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ube4bQ9ES00 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ube4bQ9ES00 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ube4bQ9ES00 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ube4bQ9ES00 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ube4bQ9ES00 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ube4bQ9ES00 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ube4bQ9ES00 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.74■□□□□ 0.59
Ube4bQ9ES00 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.74■□□□□ 0.59
Ube4bQ9ES00 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.74■□□□□ 0.59
Ube4bQ9ES00 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ube4bQ9ES00 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Ube4bQ9ES00 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ube4bQ9ES00 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ube4bQ9ES00 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ube4bQ9ES00 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ube4bQ9ES00 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ube4bQ9ES00 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ube4bQ9ES00 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ube4bQ9ES00 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ube4bQ9ES00 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Ube4bQ9ES00 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ube4bQ9ES00 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ube4bQ9ES00 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ube4bQ9ES00 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ube4bQ9ES00 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ube4bQ9ES00 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ube4bQ9ES00 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Ube4bQ9ES00 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Ube4bQ9ES00 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ube4bQ9ES00 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ube4bQ9ES00 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ube4bQ9ES00 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ube4bQ9ES00 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.72■□□□□ 0.59
Ube4bQ9ES00 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ube4bQ9ES00 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
Ube4bQ9ES00 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms