Protein–RNA interactions for Protein: Q9ERK0

Ripk4, Receptor-interacting serine/threonine-protein kinase 4, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk4Q9ERK0 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ripk4Q9ERK0 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC23.86■■□□□ 1.41
Ripk4Q9ERK0 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
Ripk4Q9ERK0 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ripk4Q9ERK0 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ripk4Q9ERK0 AC137127.1-201ENSMUST00000213466 1078 ntBASIC23.86■■□□□ 1.41
Ripk4Q9ERK0 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ripk4Q9ERK0 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
Ripk4Q9ERK0 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ripk4Q9ERK0 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ripk4Q9ERK0 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ripk4Q9ERK0 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Ripk4Q9ERK0 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ripk4Q9ERK0 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Ripk4Q9ERK0 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
Ripk4Q9ERK0 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ripk4Q9ERK0 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Ripk4Q9ERK0 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
Ripk4Q9ERK0 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Ripk4Q9ERK0 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ripk4Q9ERK0 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ripk4Q9ERK0 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
Ripk4Q9ERK0 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC23.83■■□□□ 1.41
Ripk4Q9ERK0 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
Ripk4Q9ERK0 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Ripk4Q9ERK0 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
Ripk4Q9ERK0 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ripk4Q9ERK0 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ripk4Q9ERK0 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Ripk4Q9ERK0 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC23.81■■□□□ 1.4
Ripk4Q9ERK0 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ripk4Q9ERK0 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ripk4Q9ERK0 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ripk4Q9ERK0 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
Ripk4Q9ERK0 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Ripk4Q9ERK0 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ripk4Q9ERK0 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC23.81■■□□□ 1.4
Ripk4Q9ERK0 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ripk4Q9ERK0 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ripk4Q9ERK0 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC23.8■■□□□ 1.4
Ripk4Q9ERK0 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC23.8■■□□□ 1.4
Ripk4Q9ERK0 Spcs1-207ENSMUST00000228767 1008 ntBASIC23.8■■□□□ 1.4
Ripk4Q9ERK0 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC23.8■■□□□ 1.4
Ripk4Q9ERK0 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ripk4Q9ERK0 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ripk4Q9ERK0 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ripk4Q9ERK0 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ripk4Q9ERK0 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Ripk4Q9ERK0 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Ripk4Q9ERK0 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
Ripk4Q9ERK0 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC23.79■■□□□ 1.4
Ripk4Q9ERK0 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC23.79■■□□□ 1.4
Ripk4Q9ERK0 AV356131-201ENSMUST00000206201 750 ntBASIC23.79■■□□□ 1.4
Ripk4Q9ERK0 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ripk4Q9ERK0 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ripk4Q9ERK0 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC23.79■■□□□ 1.4
Ripk4Q9ERK0 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ripk4Q9ERK0 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ripk4Q9ERK0 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ripk4Q9ERK0 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ripk4Q9ERK0 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC23.78■■□□□ 1.4
Ripk4Q9ERK0 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ripk4Q9ERK0 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Ripk4Q9ERK0 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ripk4Q9ERK0 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
Ripk4Q9ERK0 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
Ripk4Q9ERK0 Gm10033-202ENSMUST00000211874 928 ntBASIC23.78■■□□□ 1.4
Ripk4Q9ERK0 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC23.78■■□□□ 1.4
Ripk4Q9ERK0 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC23.78■■□□□ 1.4
Ripk4Q9ERK0 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ripk4Q9ERK0 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ripk4Q9ERK0 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC23.78■■□□□ 1.4
Ripk4Q9ERK0 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
Ripk4Q9ERK0 AC122428.2-201ENSMUST00000216321 1832 ntBASIC23.77■■□□□ 1.4
Ripk4Q9ERK0 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC23.77■■□□□ 1.4
Ripk4Q9ERK0 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Ripk4Q9ERK0 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ripk4Q9ERK0 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Ripk4Q9ERK0 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC23.77■■□□□ 1.4
Ripk4Q9ERK0 Gm37179-201ENSMUST00000194862 823 ntBASIC23.77■■□□□ 1.4
Ripk4Q9ERK0 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ripk4Q9ERK0 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ripk4Q9ERK0 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ripk4Q9ERK0 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ripk4Q9ERK0 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ripk4Q9ERK0 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ripk4Q9ERK0 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Ripk4Q9ERK0 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Ripk4Q9ERK0 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Ripk4Q9ERK0 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ripk4Q9ERK0 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ripk4Q9ERK0 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC23.75■■□□□ 1.39
Ripk4Q9ERK0 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ripk4Q9ERK0 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Ripk4Q9ERK0 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ripk4Q9ERK0 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Ripk4Q9ERK0 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ripk4Q9ERK0 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Ripk4Q9ERK0 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ripk4Q9ERK0 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC23.74■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms