Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Gtf3c6Q9D8P7 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gtf3c6Q9D8P7 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Gtf3c6Q9D8P7 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gtf3c6Q9D8P7 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gtf3c6Q9D8P7 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gtf3c6Q9D8P7 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gtf3c6Q9D8P7 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gtf3c6Q9D8P7 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gtf3c6Q9D8P7 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gtf3c6Q9D8P7 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gtf3c6Q9D8P7 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gtf3c6Q9D8P7 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gtf3c6Q9D8P7 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Gtf3c6Q9D8P7 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.93■□□□□ 0.94
Gtf3c6Q9D8P7 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gtf3c6Q9D8P7 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Gtf3c6Q9D8P7 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gtf3c6Q9D8P7 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gtf3c6Q9D8P7 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gtf3c6Q9D8P7 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gtf3c6Q9D8P7 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Gtf3c6Q9D8P7 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Gtf3c6Q9D8P7 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.92■□□□□ 0.94
Gtf3c6Q9D8P7 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.92■□□□□ 0.94
Gtf3c6Q9D8P7 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gtf3c6Q9D8P7 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gtf3c6Q9D8P7 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Gtf3c6Q9D8P7 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.91■□□□□ 0.94
Gtf3c6Q9D8P7 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.91■□□□□ 0.94
Gtf3c6Q9D8P7 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Gtf3c6Q9D8P7 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gtf3c6Q9D8P7 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gtf3c6Q9D8P7 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gtf3c6Q9D8P7 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gtf3c6Q9D8P7 AA386476-201ENSMUST00000098781 1665 ntBASIC20.91■□□□□ 0.94
Gtf3c6Q9D8P7 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gtf3c6Q9D8P7 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Gtf3c6Q9D8P7 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gtf3c6Q9D8P7 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gtf3c6Q9D8P7 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gtf3c6Q9D8P7 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.9■□□□□ 0.94
Gtf3c6Q9D8P7 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gtf3c6Q9D8P7 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Gtf3c6Q9D8P7 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gtf3c6Q9D8P7 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Gtf3c6Q9D8P7 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gtf3c6Q9D8P7 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Gtf3c6Q9D8P7 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gtf3c6Q9D8P7 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gtf3c6Q9D8P7 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gtf3c6Q9D8P7 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gtf3c6Q9D8P7 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gtf3c6Q9D8P7 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gtf3c6Q9D8P7 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Gtf3c6Q9D8P7 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Gtf3c6Q9D8P7 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Gtf3c6Q9D8P7 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.88■□□□□ 0.93
Gtf3c6Q9D8P7 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gtf3c6Q9D8P7 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC20.88■□□□□ 0.93
Gtf3c6Q9D8P7 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gtf3c6Q9D8P7 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
Gtf3c6Q9D8P7 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gtf3c6Q9D8P7 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Gtf3c6Q9D8P7 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gtf3c6Q9D8P7 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gtf3c6Q9D8P7 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Gtf3c6Q9D8P7 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.87■□□□□ 0.93
Gtf3c6Q9D8P7 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gtf3c6Q9D8P7 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Gtf3c6Q9D8P7 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Gtf3c6Q9D8P7 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gtf3c6Q9D8P7 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gtf3c6Q9D8P7 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gtf3c6Q9D8P7 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gtf3c6Q9D8P7 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Gtf3c6Q9D8P7 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gtf3c6Q9D8P7 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gtf3c6Q9D8P7 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gtf3c6Q9D8P7 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
Gtf3c6Q9D8P7 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
Gtf3c6Q9D8P7 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gtf3c6Q9D8P7 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Gtf3c6Q9D8P7 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Gtf3c6Q9D8P7 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gtf3c6Q9D8P7 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gtf3c6Q9D8P7 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gtf3c6Q9D8P7 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.85■□□□□ 0.93
Gtf3c6Q9D8P7 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Gtf3c6Q9D8P7 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Gtf3c6Q9D8P7 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
Gtf3c6Q9D8P7 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.85■□□□□ 0.93
Gtf3c6Q9D8P7 Gm13241-201ENSMUST00000094493 780 ntBASIC20.85■□□□□ 0.93
Gtf3c6Q9D8P7 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gtf3c6Q9D8P7 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gtf3c6Q9D8P7 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gtf3c6Q9D8P7 Gm6598-201ENSMUST00000202719 2615 ntBASIC20.85■□□□□ 0.93
Gtf3c6Q9D8P7 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Gtf3c6Q9D8P7 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.84■□□□□ 0.93
Gtf3c6Q9D8P7 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms