Protein–RNA interactions for Protein: Q9D6I0

Rtl8c, Cxx1c protein, mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl8cQ9D6I0 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtl8cQ9D6I0 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtl8cQ9D6I0 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtl8cQ9D6I0 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Rtl8cQ9D6I0 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.54■□□□□ 0.4
Rtl8cQ9D6I0 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtl8cQ9D6I0 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rtl8cQ9D6I0 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rtl8cQ9D6I0 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Rtl8cQ9D6I0 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.53■□□□□ 0.4
Rtl8cQ9D6I0 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rtl8cQ9D6I0 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rtl8cQ9D6I0 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Rtl8cQ9D6I0 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.53■□□□□ 0.4
Rtl8cQ9D6I0 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rtl8cQ9D6I0 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rtl8cQ9D6I0 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rtl8cQ9D6I0 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rtl8cQ9D6I0 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rtl8cQ9D6I0 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rtl8cQ9D6I0 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rtl8cQ9D6I0 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rtl8cQ9D6I0 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rtl8cQ9D6I0 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.52■□□□□ 0.4
Rtl8cQ9D6I0 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.52■□□□□ 0.4
Rtl8cQ9D6I0 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.52■□□□□ 0.4
Rtl8cQ9D6I0 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rtl8cQ9D6I0 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rtl8cQ9D6I0 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Rtl8cQ9D6I0 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Rtl8cQ9D6I0 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rtl8cQ9D6I0 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rtl8cQ9D6I0 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Rtl8cQ9D6I0 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rtl8cQ9D6I0 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rtl8cQ9D6I0 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rtl8cQ9D6I0 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rtl8cQ9D6I0 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rtl8cQ9D6I0 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Rtl8cQ9D6I0 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Rtl8cQ9D6I0 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Rtl8cQ9D6I0 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.51■□□□□ 0.39
Rtl8cQ9D6I0 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rtl8cQ9D6I0 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rtl8cQ9D6I0 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Rtl8cQ9D6I0 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rtl8cQ9D6I0 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rtl8cQ9D6I0 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rtl8cQ9D6I0 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rtl8cQ9D6I0 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rtl8cQ9D6I0 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rtl8cQ9D6I0 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rtl8cQ9D6I0 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rtl8cQ9D6I0 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.5■□□□□ 0.39
Rtl8cQ9D6I0 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rtl8cQ9D6I0 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rtl8cQ9D6I0 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rtl8cQ9D6I0 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rtl8cQ9D6I0 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rtl8cQ9D6I0 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rtl8cQ9D6I0 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Rtl8cQ9D6I0 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.49■□□□□ 0.39
Rtl8cQ9D6I0 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.49■□□□□ 0.39
Rtl8cQ9D6I0 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rtl8cQ9D6I0 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rtl8cQ9D6I0 AA386476-201ENSMUST00000098781 1665 ntBASIC17.48■□□□□ 0.39
Rtl8cQ9D6I0 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Rtl8cQ9D6I0 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Rtl8cQ9D6I0 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rtl8cQ9D6I0 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Rtl8cQ9D6I0 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rtl8cQ9D6I0 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.48■□□□□ 0.39
Rtl8cQ9D6I0 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rtl8cQ9D6I0 Gm13241-201ENSMUST00000094493 780 ntBASIC17.48■□□□□ 0.39
Rtl8cQ9D6I0 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rtl8cQ9D6I0 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rtl8cQ9D6I0 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Rtl8cQ9D6I0 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rtl8cQ9D6I0 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rtl8cQ9D6I0 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Rtl8cQ9D6I0 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Rtl8cQ9D6I0 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rtl8cQ9D6I0 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rtl8cQ9D6I0 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rtl8cQ9D6I0 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Rtl8cQ9D6I0 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rtl8cQ9D6I0 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Rtl8cQ9D6I0 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rtl8cQ9D6I0 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Rtl8cQ9D6I0 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rtl8cQ9D6I0 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rtl8cQ9D6I0 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rtl8cQ9D6I0 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rtl8cQ9D6I0 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rtl8cQ9D6I0 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rtl8cQ9D6I0 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.46■□□□□ 0.39
Rtl8cQ9D6I0 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rtl8cQ9D6I0 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rtl8cQ9D6I0 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Rtl8cQ9D6I0 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms