Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx47Q9CWX9 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Ddx47Q9CWX9 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx47Q9CWX9 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx47Q9CWX9 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx47Q9CWX9 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Ddx47Q9CWX9 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx47Q9CWX9 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
Ddx47Q9CWX9 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx47Q9CWX9 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.18■□□□□ 0.82
Ddx47Q9CWX9 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx47Q9CWX9 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Ddx47Q9CWX9 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx47Q9CWX9 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.18■□□□□ 0.82
Ddx47Q9CWX9 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.18■□□□□ 0.82
Ddx47Q9CWX9 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx47Q9CWX9 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx47Q9CWX9 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx47Q9CWX9 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx47Q9CWX9 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx47Q9CWX9 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
Ddx47Q9CWX9 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Ddx47Q9CWX9 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx47Q9CWX9 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.17■□□□□ 0.82
Ddx47Q9CWX9 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx47Q9CWX9 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx47Q9CWX9 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.16■□□□□ 0.82
Ddx47Q9CWX9 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ddx47Q9CWX9 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.16■□□□□ 0.82
Ddx47Q9CWX9 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ddx47Q9CWX9 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.16■□□□□ 0.82
Ddx47Q9CWX9 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ddx47Q9CWX9 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.15■□□□□ 0.82
Ddx47Q9CWX9 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ddx47Q9CWX9 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ddx47Q9CWX9 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ddx47Q9CWX9 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.15■□□□□ 0.82
Ddx47Q9CWX9 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ddx47Q9CWX9 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.15■□□□□ 0.82
Ddx47Q9CWX9 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ddx47Q9CWX9 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ddx47Q9CWX9 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ddx47Q9CWX9 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ddx47Q9CWX9 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ddx47Q9CWX9 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Ddx47Q9CWX9 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.14■□□□□ 0.81
Ddx47Q9CWX9 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.14■□□□□ 0.81
Ddx47Q9CWX9 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ddx47Q9CWX9 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ddx47Q9CWX9 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ddx47Q9CWX9 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ddx47Q9CWX9 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ddx47Q9CWX9 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx47Q9CWX9 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx47Q9CWX9 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx47Q9CWX9 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.13■□□□□ 0.81
Ddx47Q9CWX9 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx47Q9CWX9 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.13■□□□□ 0.81
Ddx47Q9CWX9 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Ddx47Q9CWX9 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx47Q9CWX9 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx47Q9CWX9 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx47Q9CWX9 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.13■□□□□ 0.81
Ddx47Q9CWX9 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ddx47Q9CWX9 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ddx47Q9CWX9 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ddx47Q9CWX9 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ddx47Q9CWX9 Gm10420-201ENSMUST00000121713 882 ntBASIC20.12■□□□□ 0.81
Ddx47Q9CWX9 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ddx47Q9CWX9 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ddx47Q9CWX9 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Ddx47Q9CWX9 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ddx47Q9CWX9 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx47Q9CWX9 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx47Q9CWX9 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx47Q9CWX9 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
Ddx47Q9CWX9 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx47Q9CWX9 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Ddx47Q9CWX9 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx47Q9CWX9 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx47Q9CWX9 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx47Q9CWX9 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Ddx47Q9CWX9 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx47Q9CWX9 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx47Q9CWX9 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
Ddx47Q9CWX9 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.1■□□□□ 0.81
Ddx47Q9CWX9 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ddx47Q9CWX9 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ddx47Q9CWX9 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ddx47Q9CWX9 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Ddx47Q9CWX9 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Ddx47Q9CWX9 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ddx47Q9CWX9 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
Ddx47Q9CWX9 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ddx47Q9CWX9 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ddx47Q9CWX9 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ddx47Q9CWX9 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Ddx47Q9CWX9 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ddx47Q9CWX9 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.09■□□□□ 0.81
Ddx47Q9CWX9 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms