Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.51■□□□□ 0.71
Lrrc40Q9CRC8 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lrrc40Q9CRC8 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lrrc40Q9CRC8 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lrrc40Q9CRC8 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lrrc40Q9CRC8 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lrrc40Q9CRC8 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lrrc40Q9CRC8 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Lrrc40Q9CRC8 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lrrc40Q9CRC8 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lrrc40Q9CRC8 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Lrrc40Q9CRC8 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lrrc40Q9CRC8 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lrrc40Q9CRC8 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lrrc40Q9CRC8 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lrrc40Q9CRC8 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Lrrc40Q9CRC8 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lrrc40Q9CRC8 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.49■□□□□ 0.71
Lrrc40Q9CRC8 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lrrc40Q9CRC8 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lrrc40Q9CRC8 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.49■□□□□ 0.71
Lrrc40Q9CRC8 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.49■□□□□ 0.71
Lrrc40Q9CRC8 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.49■□□□□ 0.71
Lrrc40Q9CRC8 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lrrc40Q9CRC8 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lrrc40Q9CRC8 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Lrrc40Q9CRC8 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Lrrc40Q9CRC8 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Lrrc40Q9CRC8 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lrrc40Q9CRC8 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Lrrc40Q9CRC8 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.48■□□□□ 0.71
Lrrc40Q9CRC8 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lrrc40Q9CRC8 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Lrrc40Q9CRC8 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.48■□□□□ 0.71
Lrrc40Q9CRC8 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
Lrrc40Q9CRC8 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.48■□□□□ 0.71
Lrrc40Q9CRC8 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Lrrc40Q9CRC8 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lrrc40Q9CRC8 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lrrc40Q9CRC8 AA386476-201ENSMUST00000098781 1665 ntBASIC19.47■□□□□ 0.71
Lrrc40Q9CRC8 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Lrrc40Q9CRC8 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lrrc40Q9CRC8 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.47■□□□□ 0.71
Lrrc40Q9CRC8 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lrrc40Q9CRC8 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.46■□□□□ 0.71
Lrrc40Q9CRC8 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lrrc40Q9CRC8 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.46■□□□□ 0.71
Lrrc40Q9CRC8 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.46■□□□□ 0.71
Lrrc40Q9CRC8 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lrrc40Q9CRC8 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Lrrc40Q9CRC8 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.45■□□□□ 0.7
Lrrc40Q9CRC8 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lrrc40Q9CRC8 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lrrc40Q9CRC8 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
Lrrc40Q9CRC8 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lrrc40Q9CRC8 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lrrc40Q9CRC8 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.45■□□□□ 0.7
Lrrc40Q9CRC8 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.45■□□□□ 0.7
Lrrc40Q9CRC8 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lrrc40Q9CRC8 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lrrc40Q9CRC8 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Lrrc40Q9CRC8 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lrrc40Q9CRC8 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Lrrc40Q9CRC8 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Lrrc40Q9CRC8 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lrrc40Q9CRC8 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Lrrc40Q9CRC8 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lrrc40Q9CRC8 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.44■□□□□ 0.7
Lrrc40Q9CRC8 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lrrc40Q9CRC8 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lrrc40Q9CRC8 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lrrc40Q9CRC8 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lrrc40Q9CRC8 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Lrrc40Q9CRC8 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lrrc40Q9CRC8 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Lrrc40Q9CRC8 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.43■□□□□ 0.7
Lrrc40Q9CRC8 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Lrrc40Q9CRC8 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lrrc40Q9CRC8 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lrrc40Q9CRC8 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Lrrc40Q9CRC8 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lrrc40Q9CRC8 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Lrrc40Q9CRC8 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lrrc40Q9CRC8 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lrrc40Q9CRC8 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lrrc40Q9CRC8 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Lrrc40Q9CRC8 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Lrrc40Q9CRC8 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lrrc40Q9CRC8 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lrrc40Q9CRC8 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lrrc40Q9CRC8 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lrrc40Q9CRC8 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Lrrc40Q9CRC8 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Lrrc40Q9CRC8 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.41■□□□□ 0.7
Lrrc40Q9CRC8 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lrrc40Q9CRC8 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lrrc40Q9CRC8 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lrrc40Q9CRC8 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lrrc40Q9CRC8 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Lrrc40Q9CRC8 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms