Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Trim11Q99PQ2 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trim11Q99PQ2 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Trim11Q99PQ2 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trim11Q99PQ2 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trim11Q99PQ2 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC22.36■■□□□ 1.17
Trim11Q99PQ2 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trim11Q99PQ2 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
Trim11Q99PQ2 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trim11Q99PQ2 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trim11Q99PQ2 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Trim11Q99PQ2 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trim11Q99PQ2 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trim11Q99PQ2 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trim11Q99PQ2 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Trim11Q99PQ2 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trim11Q99PQ2 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC22.34■■□□□ 1.17
Trim11Q99PQ2 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Trim11Q99PQ2 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Trim11Q99PQ2 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC22.34■■□□□ 1.17
Trim11Q99PQ2 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Trim11Q99PQ2 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Trim11Q99PQ2 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Trim11Q99PQ2 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Trim11Q99PQ2 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
Trim11Q99PQ2 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Trim11Q99PQ2 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Trim11Q99PQ2 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Trim11Q99PQ2 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Trim11Q99PQ2 Gm43545-201ENSMUST00000196765 2779 ntBASIC22.33■■□□□ 1.17
Trim11Q99PQ2 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Trim11Q99PQ2 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Trim11Q99PQ2 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Trim11Q99PQ2 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Trim11Q99PQ2 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC22.32■■□□□ 1.16
Trim11Q99PQ2 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC22.32■■□□□ 1.16
Trim11Q99PQ2 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC22.32■■□□□ 1.16
Trim11Q99PQ2 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Trim11Q99PQ2 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Trim11Q99PQ2 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Trim11Q99PQ2 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Trim11Q99PQ2 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Trim11Q99PQ2 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Trim11Q99PQ2 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Trim11Q99PQ2 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Trim11Q99PQ2 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Trim11Q99PQ2 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trim11Q99PQ2 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC22.31■■□□□ 1.16
Trim11Q99PQ2 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Trim11Q99PQ2 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trim11Q99PQ2 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC22.3■■□□□ 1.16
Trim11Q99PQ2 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Trim11Q99PQ2 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trim11Q99PQ2 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
Trim11Q99PQ2 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC22.3■■□□□ 1.16
Trim11Q99PQ2 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC22.3■■□□□ 1.16
Trim11Q99PQ2 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Trim11Q99PQ2 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trim11Q99PQ2 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC22.3■■□□□ 1.16
Trim11Q99PQ2 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trim11Q99PQ2 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC22.29■■□□□ 1.16
Trim11Q99PQ2 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trim11Q99PQ2 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Trim11Q99PQ2 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trim11Q99PQ2 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trim11Q99PQ2 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Trim11Q99PQ2 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC22.28■■□□□ 1.16
Trim11Q99PQ2 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC22.28■■□□□ 1.16
Trim11Q99PQ2 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trim11Q99PQ2 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trim11Q99PQ2 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trim11Q99PQ2 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC22.28■■□□□ 1.16
Trim11Q99PQ2 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC22.28■■□□□ 1.16
Trim11Q99PQ2 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Trim11Q99PQ2 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trim11Q99PQ2 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Trim11Q99PQ2 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC22.27■■□□□ 1.16
Trim11Q99PQ2 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Trim11Q99PQ2 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC22.27■■□□□ 1.16
Trim11Q99PQ2 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Trim11Q99PQ2 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
Trim11Q99PQ2 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Trim11Q99PQ2 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC22.26■■□□□ 1.15
Trim11Q99PQ2 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Trim11Q99PQ2 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Trim11Q99PQ2 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
Trim11Q99PQ2 Gm9207-201ENSMUST00000198773 1115 ntBASIC22.26■■□□□ 1.15
Trim11Q99PQ2 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC22.26■■□□□ 1.15
Trim11Q99PQ2 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Trim11Q99PQ2 AA386476-201ENSMUST00000098781 1665 ntBASIC22.26■■□□□ 1.15
Trim11Q99PQ2 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC22.26■■□□□ 1.15
Trim11Q99PQ2 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Trim11Q99PQ2 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Trim11Q99PQ2 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Trim11Q99PQ2 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trim11Q99PQ2 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trim11Q99PQ2 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Trim11Q99PQ2 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
Trim11Q99PQ2 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trim11Q99PQ2 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC22.25■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms