Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Gm43137-201ENSMUST00000198052 594 ntBASIC21.09■□□□□ 0.97
Tlr3Q99MB1 Slc35b2-207ENSMUST00000226086 850 ntBASIC21.09■□□□□ 0.97
Tlr3Q99MB1 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Tlr3Q99MB1 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tlr3Q99MB1 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
Tlr3Q99MB1 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Tlr3Q99MB1 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Tlr3Q99MB1 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tlr3Q99MB1 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Tlr3Q99MB1 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.08■□□□□ 0.97
Tlr3Q99MB1 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.08■□□□□ 0.97
Tlr3Q99MB1 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tlr3Q99MB1 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tlr3Q99MB1 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Tlr3Q99MB1 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Tlr3Q99MB1 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tlr3Q99MB1 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21.07■□□□□ 0.96
Tlr3Q99MB1 Gm8495-201ENSMUST00000188740 694 ntBASIC21.07■□□□□ 0.96
Tlr3Q99MB1 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tlr3Q99MB1 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tlr3Q99MB1 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tlr3Q99MB1 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC21.06■□□□□ 0.96
Tlr3Q99MB1 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tlr3Q99MB1 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tlr3Q99MB1 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Tlr3Q99MB1 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tlr3Q99MB1 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tlr3Q99MB1 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tlr3Q99MB1 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tlr3Q99MB1 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Tlr3Q99MB1 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Tlr3Q99MB1 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Tlr3Q99MB1 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Tlr3Q99MB1 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Tlr3Q99MB1 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.05■□□□□ 0.96
Tlr3Q99MB1 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tlr3Q99MB1 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tlr3Q99MB1 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
Tlr3Q99MB1 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Tlr3Q99MB1 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Tlr3Q99MB1 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tlr3Q99MB1 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.04■□□□□ 0.96
Tlr3Q99MB1 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tlr3Q99MB1 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.04■□□□□ 0.96
Tlr3Q99MB1 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Tlr3Q99MB1 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
Tlr3Q99MB1 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Tlr3Q99MB1 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Tlr3Q99MB1 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Tlr3Q99MB1 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Tlr3Q99MB1 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
Tlr3Q99MB1 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Tlr3Q99MB1 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.02■□□□□ 0.96
Tlr3Q99MB1 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tlr3Q99MB1 Gm18284-201ENSMUST00000172604 624 ntBASIC21.02■□□□□ 0.96
Tlr3Q99MB1 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.02■□□□□ 0.96
Tlr3Q99MB1 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tlr3Q99MB1 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
Tlr3Q99MB1 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tlr3Q99MB1 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tlr3Q99MB1 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC21.01■□□□□ 0.95
Tlr3Q99MB1 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.01■□□□□ 0.95
Tlr3Q99MB1 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Tlr3Q99MB1 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Tlr3Q99MB1 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Tlr3Q99MB1 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tlr3Q99MB1 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tlr3Q99MB1 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tlr3Q99MB1 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Tlr3Q99MB1 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.01■□□□□ 0.95
Tlr3Q99MB1 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21■□□□□ 0.95
Tlr3Q99MB1 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Tlr3Q99MB1 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
Tlr3Q99MB1 Notumos-201ENSMUST00000151998 2659 ntBASIC21■□□□□ 0.95
Tlr3Q99MB1 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tlr3Q99MB1 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tlr3Q99MB1 Gm6139-201ENSMUST00000079261 882 ntBASIC21■□□□□ 0.95
Tlr3Q99MB1 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21■□□□□ 0.95
Tlr3Q99MB1 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tlr3Q99MB1 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
Tlr3Q99MB1 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tlr3Q99MB1 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tlr3Q99MB1 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tlr3Q99MB1 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tlr3Q99MB1 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tlr3Q99MB1 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.99■□□□□ 0.95
Tlr3Q99MB1 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Tlr3Q99MB1 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Tlr3Q99MB1 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.99■□□□□ 0.95
Tlr3Q99MB1 Spcs1-204ENSMUST00000226782 949 ntBASIC20.99■□□□□ 0.95
Tlr3Q99MB1 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tlr3Q99MB1 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tlr3Q99MB1 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.99■□□□□ 0.95
Tlr3Q99MB1 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.99■□□□□ 0.95
Tlr3Q99MB1 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tlr3Q99MB1 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tlr3Q99MB1 AA386476-201ENSMUST00000098781 1665 ntBASIC20.99■□□□□ 0.95
Tlr3Q99MB1 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tlr3Q99MB1 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tlr3Q99MB1 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms