Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.65■□□□□ 0.74
Cstf1Q99LC2 Gm12527-201ENSMUST00000117967 564 ntBASIC19.65■□□□□ 0.74
Cstf1Q99LC2 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Cstf1Q99LC2 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cstf1Q99LC2 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Cstf1Q99LC2 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Cstf1Q99LC2 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cstf1Q99LC2 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cstf1Q99LC2 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Cstf1Q99LC2 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.64■□□□□ 0.73
Cstf1Q99LC2 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cstf1Q99LC2 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cstf1Q99LC2 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
Cstf1Q99LC2 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cstf1Q99LC2 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cstf1Q99LC2 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cstf1Q99LC2 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cstf1Q99LC2 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cstf1Q99LC2 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Cstf1Q99LC2 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cstf1Q99LC2 Mir6236-201ENSMUST00000184437 123 ntBASIC19.63■□□□□ 0.73
Cstf1Q99LC2 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cstf1Q99LC2 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cstf1Q99LC2 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
Cstf1Q99LC2 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cstf1Q99LC2 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Cstf1Q99LC2 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cstf1Q99LC2 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cstf1Q99LC2 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cstf1Q99LC2 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.62■□□□□ 0.73
Cstf1Q99LC2 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.62■□□□□ 0.73
Cstf1Q99LC2 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Cstf1Q99LC2 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.62■□□□□ 0.73
Cstf1Q99LC2 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cstf1Q99LC2 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cstf1Q99LC2 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cstf1Q99LC2 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cstf1Q99LC2 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cstf1Q99LC2 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cstf1Q99LC2 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cstf1Q99LC2 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.6■□□□□ 0.73
Cstf1Q99LC2 Gm5408-201ENSMUST00000197998 747 ntBASIC19.6■□□□□ 0.73
Cstf1Q99LC2 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.6■□□□□ 0.73
Cstf1Q99LC2 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cstf1Q99LC2 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cstf1Q99LC2 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.59■□□□□ 0.73
Cstf1Q99LC2 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cstf1Q99LC2 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cstf1Q99LC2 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cstf1Q99LC2 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cstf1Q99LC2 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cstf1Q99LC2 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Cstf1Q99LC2 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.58■□□□□ 0.73
Cstf1Q99LC2 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cstf1Q99LC2 Gm13168-201ENSMUST00000121771 632 ntBASIC19.58■□□□□ 0.72
Cstf1Q99LC2 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cstf1Q99LC2 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cstf1Q99LC2 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cstf1Q99LC2 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cstf1Q99LC2 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.57■□□□□ 0.72
Cstf1Q99LC2 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.57■□□□□ 0.72
Cstf1Q99LC2 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Cstf1Q99LC2 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cstf1Q99LC2 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cstf1Q99LC2 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.57■□□□□ 0.72
Cstf1Q99LC2 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cstf1Q99LC2 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.57■□□□□ 0.72
Cstf1Q99LC2 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cstf1Q99LC2 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cstf1Q99LC2 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cstf1Q99LC2 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cstf1Q99LC2 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cstf1Q99LC2 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cstf1Q99LC2 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.56■□□□□ 0.72
Cstf1Q99LC2 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.56■□□□□ 0.72
Cstf1Q99LC2 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cstf1Q99LC2 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.56■□□□□ 0.72
Cstf1Q99LC2 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cstf1Q99LC2 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cstf1Q99LC2 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.56■□□□□ 0.72
Cstf1Q99LC2 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cstf1Q99LC2 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cstf1Q99LC2 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cstf1Q99LC2 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cstf1Q99LC2 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Cstf1Q99LC2 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cstf1Q99LC2 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Cstf1Q99LC2 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cstf1Q99LC2 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cstf1Q99LC2 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.55■□□□□ 0.72
Cstf1Q99LC2 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cstf1Q99LC2 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cstf1Q99LC2 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Cstf1Q99LC2 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cstf1Q99LC2 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cstf1Q99LC2 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cstf1Q99LC2 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.54■□□□□ 0.72
Cstf1Q99LC2 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.54■□□□□ 0.72
Cstf1Q99LC2 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.54■□□□□ 0.72
Cstf1Q99LC2 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms