Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdha9Q91Y11 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Pcdha9Q91Y11 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.97■□□□□ 0.95
Pcdha9Q91Y11 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdha9Q91Y11 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdha9Q91Y11 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdha9Q91Y11 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdha9Q91Y11 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdha9Q91Y11 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdha9Q91Y11 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdha9Q91Y11 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.96■□□□□ 0.95
Pcdha9Q91Y11 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdha9Q91Y11 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Pcdha9Q91Y11 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdha9Q91Y11 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Pcdha9Q91Y11 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdha9Q91Y11 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdha9Q91Y11 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdha9Q91Y11 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdha9Q91Y11 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdha9Q91Y11 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdha9Q91Y11 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdha9Q91Y11 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdha9Q91Y11 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdha9Q91Y11 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdha9Q91Y11 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.94■□□□□ 0.94
Pcdha9Q91Y11 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.94■□□□□ 0.94
Pcdha9Q91Y11 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdha9Q91Y11 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdha9Q91Y11 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdha9Q91Y11 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdha9Q91Y11 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdha9Q91Y11 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdha9Q91Y11 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Pcdha9Q91Y11 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Pcdha9Q91Y11 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.93■□□□□ 0.94
Pcdha9Q91Y11 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Pcdha9Q91Y11 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdha9Q91Y11 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdha9Q91Y11 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
Pcdha9Q91Y11 Smad6-203ENSMUST00000179458 273 ntBASIC20.92■□□□□ 0.94
Pcdha9Q91Y11 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdha9Q91Y11 Serp2-204ENSMUST00000228055 705 ntBASIC20.92■□□□□ 0.94
Pcdha9Q91Y11 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdha9Q91Y11 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdha9Q91Y11 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdha9Q91Y11 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.92■□□□□ 0.94
Pcdha9Q91Y11 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdha9Q91Y11 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdha9Q91Y11 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
Pcdha9Q91Y11 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdha9Q91Y11 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdha9Q91Y11 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdha9Q91Y11 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdha9Q91Y11 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdha9Q91Y11 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdha9Q91Y11 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdha9Q91Y11 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Pcdha9Q91Y11 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.9■□□□□ 0.94
Pcdha9Q91Y11 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Pcdha9Q91Y11 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdha9Q91Y11 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Pcdha9Q91Y11 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdha9Q91Y11 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdha9Q91Y11 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdha9Q91Y11 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdha9Q91Y11 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.89■□□□□ 0.93
Pcdha9Q91Y11 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.89■□□□□ 0.93
Pcdha9Q91Y11 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdha9Q91Y11 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
Pcdha9Q91Y11 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdha9Q91Y11 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdha9Q91Y11 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdha9Q91Y11 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdha9Q91Y11 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.88■□□□□ 0.93
Pcdha9Q91Y11 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdha9Q91Y11 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdha9Q91Y11 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdha9Q91Y11 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.88■□□□□ 0.93
Pcdha9Q91Y11 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdha9Q91Y11 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdha9Q91Y11 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
Pcdha9Q91Y11 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdha9Q91Y11 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdha9Q91Y11 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdha9Q91Y11 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdha9Q91Y11 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdha9Q91Y11 Gm43017-201ENSMUST00000198296 752 ntBASIC20.87■□□□□ 0.93
Pcdha9Q91Y11 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Pcdha9Q91Y11 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.86■□□□□ 0.93
Pcdha9Q91Y11 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdha9Q91Y11 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdha9Q91Y11 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdha9Q91Y11 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdha9Q91Y11 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Pcdha9Q91Y11 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.85■□□□□ 0.93
Pcdha9Q91Y11 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdha9Q91Y11 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdha9Q91Y11 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdha9Q91Y11 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms