Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb20Q91XZ9 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.86■□□□□ 0.61
Pcdhb20Q91XZ9 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb20Q91XZ9 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb20Q91XZ9 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC18.86■□□□□ 0.61
Pcdhb20Q91XZ9 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb20Q91XZ9 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb20Q91XZ9 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb20Q91XZ9 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.85■□□□□ 0.61
Pcdhb20Q91XZ9 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.85■□□□□ 0.61
Pcdhb20Q91XZ9 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Pcdhb20Q91XZ9 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb20Q91XZ9 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb20Q91XZ9 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb20Q91XZ9 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.85■□□□□ 0.61
Pcdhb20Q91XZ9 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.85■□□□□ 0.61
Pcdhb20Q91XZ9 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb20Q91XZ9 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb20Q91XZ9 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb20Q91XZ9 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb20Q91XZ9 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb20Q91XZ9 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Pcdhb20Q91XZ9 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb20Q91XZ9 Gm18284-201ENSMUST00000172604 624 ntBASIC18.84■□□□□ 0.61
Pcdhb20Q91XZ9 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb20Q91XZ9 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb20Q91XZ9 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb20Q91XZ9 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Pcdhb20Q91XZ9 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb20Q91XZ9 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Pcdhb20Q91XZ9 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb20Q91XZ9 Gm43930-201ENSMUST00000203868 845 ntBASIC18.83■□□□□ 0.6
Pcdhb20Q91XZ9 AC158982.1-201ENSMUST00000228377 901 ntBASIC18.83■□□□□ 0.6
Pcdhb20Q91XZ9 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb20Q91XZ9 Gm5049-201ENSMUST00000195878 1590 ntBASIC18.83■□□□□ 0.6
Pcdhb20Q91XZ9 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb20Q91XZ9 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb20Q91XZ9 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb20Q91XZ9 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb20Q91XZ9 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.82■□□□□ 0.6
Pcdhb20Q91XZ9 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Pcdhb20Q91XZ9 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.82■□□□□ 0.6
Pcdhb20Q91XZ9 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb20Q91XZ9 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.82■□□□□ 0.6
Pcdhb20Q91XZ9 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb20Q91XZ9 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Pcdhb20Q91XZ9 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Pcdhb20Q91XZ9 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb20Q91XZ9 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb20Q91XZ9 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb20Q91XZ9 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.82■□□□□ 0.6
Pcdhb20Q91XZ9 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb20Q91XZ9 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.81■□□□□ 0.6
Pcdhb20Q91XZ9 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb20Q91XZ9 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb20Q91XZ9 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb20Q91XZ9 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb20Q91XZ9 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb20Q91XZ9 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.81■□□□□ 0.6
Pcdhb20Q91XZ9 Gm8495-201ENSMUST00000188740 694 ntBASIC18.81■□□□□ 0.6
Pcdhb20Q91XZ9 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.81■□□□□ 0.6
Pcdhb20Q91XZ9 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb20Q91XZ9 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Pcdhb20Q91XZ9 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
Pcdhb20Q91XZ9 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb20Q91XZ9 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Pcdhb20Q91XZ9 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb20Q91XZ9 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb20Q91XZ9 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.81■□□□□ 0.6
Pcdhb20Q91XZ9 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb20Q91XZ9 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Pcdhb20Q91XZ9 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.8■□□□□ 0.6
Pcdhb20Q91XZ9 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Pcdhb20Q91XZ9 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.8■□□□□ 0.6
Pcdhb20Q91XZ9 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC18.8■□□□□ 0.6
Pcdhb20Q91XZ9 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb20Q91XZ9 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb20Q91XZ9 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb20Q91XZ9 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb20Q91XZ9 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb20Q91XZ9 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.8■□□□□ 0.6
Pcdhb20Q91XZ9 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Pcdhb20Q91XZ9 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb20Q91XZ9 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb20Q91XZ9 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb20Q91XZ9 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb20Q91XZ9 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb20Q91XZ9 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb20Q91XZ9 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC18.79■□□□□ 0.6
Pcdhb20Q91XZ9 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb20Q91XZ9 Gpr146-202ENSMUST00000053120 1040 ntBASIC18.79■□□□□ 0.6
Pcdhb20Q91XZ9 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Pcdhb20Q91XZ9 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb20Q91XZ9 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Pcdhb20Q91XZ9 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Pcdhb20Q91XZ9 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb20Q91XZ9 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Pcdhb20Q91XZ9 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Pcdhb20Q91XZ9 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Pcdhb20Q91XZ9 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms