Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.76■□□□□ 0.91
Pcdhgb4Q91XX6 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.76■□□□□ 0.91
Pcdhgb4Q91XX6 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhgb4Q91XX6 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhgb4Q91XX6 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhgb4Q91XX6 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhgb4Q91XX6 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.75■□□□□ 0.91
Pcdhgb4Q91XX6 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.75■□□□□ 0.91
Pcdhgb4Q91XX6 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Pcdhgb4Q91XX6 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhgb4Q91XX6 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
Pcdhgb4Q91XX6 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhgb4Q91XX6 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.75■□□□□ 0.91
Pcdhgb4Q91XX6 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhgb4Q91XX6 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhgb4Q91XX6 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhgb4Q91XX6 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhgb4Q91XX6 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.75■□□□□ 0.91
Pcdhgb4Q91XX6 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhgb4Q91XX6 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhgb4Q91XX6 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Pcdhgb4Q91XX6 Gm12922-201ENSMUST00000120626 809 ntBASIC20.74■□□□□ 0.91
Pcdhgb4Q91XX6 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhgb4Q91XX6 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhgb4Q91XX6 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhgb4Q91XX6 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhgb4Q91XX6 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhgb4Q91XX6 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhgb4Q91XX6 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhgb4Q91XX6 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.73■□□□□ 0.91
Pcdhgb4Q91XX6 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Pcdhgb4Q91XX6 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.72■□□□□ 0.91
Pcdhgb4Q91XX6 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhgb4Q91XX6 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhgb4Q91XX6 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Pcdhgb4Q91XX6 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.72■□□□□ 0.91
Pcdhgb4Q91XX6 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhgb4Q91XX6 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhgb4Q91XX6 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhgb4Q91XX6 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhgb4Q91XX6 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhgb4Q91XX6 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.71■□□□□ 0.91
Pcdhgb4Q91XX6 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhgb4Q91XX6 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhgb4Q91XX6 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.71■□□□□ 0.91
Pcdhgb4Q91XX6 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhgb4Q91XX6 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhgb4Q91XX6 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhgb4Q91XX6 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhgb4Q91XX6 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhgb4Q91XX6 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhgb4Q91XX6 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhgb4Q91XX6 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.7■□□□□ 0.9
Pcdhgb4Q91XX6 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhgb4Q91XX6 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhgb4Q91XX6 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhgb4Q91XX6 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhgb4Q91XX6 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Pcdhgb4Q91XX6 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
Pcdhgb4Q91XX6 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Pcdhgb4Q91XX6 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhgb4Q91XX6 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhgb4Q91XX6 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.68■□□□□ 0.9
Pcdhgb4Q91XX6 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhgb4Q91XX6 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.68■□□□□ 0.9
Pcdhgb4Q91XX6 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhgb4Q91XX6 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhgb4Q91XX6 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhgb4Q91XX6 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.68■□□□□ 0.9
Pcdhgb4Q91XX6 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhgb4Q91XX6 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhgb4Q91XX6 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhgb4Q91XX6 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhgb4Q91XX6 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhgb4Q91XX6 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhgb4Q91XX6 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Pcdhgb4Q91XX6 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhgb4Q91XX6 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhgb4Q91XX6 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhgb4Q91XX6 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhgb4Q91XX6 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.67■□□□□ 0.9
Pcdhgb4Q91XX6 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhgb4Q91XX6 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Pcdhgb4Q91XX6 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
Pcdhgb4Q91XX6 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhgb4Q91XX6 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhgb4Q91XX6 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.66■□□□□ 0.9
Pcdhgb4Q91XX6 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
Pcdhgb4Q91XX6 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.66■□□□□ 0.9
Pcdhgb4Q91XX6 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
Pcdhgb4Q91XX6 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhgb4Q91XX6 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.66■□□□□ 0.9
Pcdhgb4Q91XX6 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhgb4Q91XX6 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Pcdhgb4Q91XX6 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhgb4Q91XX6 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.66■□□□□ 0.9
Pcdhgb4Q91XX6 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhgb4Q91XX6 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhgb4Q91XX6 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhgb4Q91XX6 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms